Gene Pnuc_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1744 
Symbol 
ID5053984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1815771 
End bp1816331 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content46% 
IMG OID640471917 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_001156521 
Protein GI145589924 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGTC GGGGTGCATT AACCTGCCTA TGCGGCTTGA GCCTCGGACT ATTAAGTCAA 
AGCGCTCTAG CGAAAACTGA ACTTGCCTCA GTTCCCCTAG CGCAACATGA ATTAGGTATG 
CGTGCAGCTA TCGCCATCGC TGCACAAAAT GCGAGCTACC CATTTGGTGC AGCAATTACC 
AACTCCAAGA GTGGCAAAAT TCTTGCACAA GGCGTAAACA AGACCTTTTC CAACCCAGTA 
CTTCATGGTG AAATGGTTTG CATCAACCAA TATGTCGCAC AGCATGGTAA TCAAGGCTGG 
GCTAATCTCA TTTTGTATAC AACTGGAGAG CCTTGCCCTA TGTGTATGAG CGCCCTCATC 
TGGAGTGGCA TAGGGGGCGT AGTTTACGGC AGTTCAGCCA ACACCATTAA AAAGTCAGGC 
ATTGATATCT TTACCTTTAG TGCCAAAGAA ATCAATCAAG GAAACAACTT TAGCCAAACT 
CAATTACTGG GCGGCATCCT TGAAGCAGAG TGCGACTCTC TATTTGCCAA CCGGAAGATA 
ACAACCCCTA TTAATGCATA A
 
Protein sequence
MNRRGALTCL CGLSLGLLSQ SALAKTELAS VPLAQHELGM RAAIAIAAQN ASYPFGAAIT 
NSKSGKILAQ GVNKTFSNPV LHGEMVCINQ YVAQHGNQGW ANLILYTTGE PCPMCMSALI 
WSGIGGVVYG SSANTIKKSG IDIFTFSAKE INQGNNFSQT QLLGGILEAE CDSLFANRKI 
TTPINA