Gene Pnuc_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1625 
Symbol 
ID5052614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1693860 
End bp1694288 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content41% 
IMG OID640471798 
Producthypothetical protein 
Protein accessionYP_001156403 
Protein GI145589806 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT GGCAAATGCG AAGAAACTGC GCTTTGACTC CAAAGCAGCT TCTACAGTTT 
TATATCGCAT TAGTCTGTCT TTCTTTAGTG GTAGCTACAG GTTTCTTTTT GGCTGGCGTT 
TGGGTGATCC CGATTTTTAC AGCAATAGAG TTAAGCGCGG TAACGCTTGG TTTTTTAATT 
TACTGCAGGC ACGCGCTTGA TTGTGAAACC ATTGAAATTG ATGGCACACG GTTAATTGTT 
AAGAAATTTA TTGGATACAA AGAAACCATA TATGAATTCA ATTCACGATG GGCAAAAATC 
GAGCCGCCGA TTGCCGGCTC CAAAACATTC CACATCATCC AATCTAATTT ACGAGTTGAA 
CTTGGCCAGT TTATAAGACA CGAGCAGCAG ATGGCTTTAA TTGCCTCTAT ACGCCCCCAT 
CTAGGATGA
 
Protein sequence
MKRWQMRRNC ALTPKQLLQF YIALVCLSLV VATGFFLAGV WVIPIFTAIE LSAVTLGFLI 
YCRHALDCET IEIDGTRLIV KKFIGYKETI YEFNSRWAKI EPPIAGSKTF HIIQSNLRVE 
LGQFIRHEQQ MALIASIRPH LG