Gene Pnuc_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1622 
Symbol 
ID5052475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1689617 
End bp1690480 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID640471795 
Producthypothetical protein 
Protein accessionYP_001156400 
Protein GI145589803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATCCC CTATCGCCCT CCAATTGTTT AAATACATAC TGCTTCTGCT TTTTCTTATT 
TCAACATCTG CAGTTGCCTT TGAACCATTA AATACAGATG ATGCGGGTAC TGTAGAGGCA 
GGCAGAAATC AAATAGAGCA ATATTTTTTC TCTATTAATC GGCATGGCAA TACAAGCGCC 
ACTCCAACTG ATATTGTTAC TCCGGGTGAG GAATACTCTG GACAGGATAG CGCTAAAGCA 
TTTCCATTTA CGTATACCAG GGGTCTTACC AAAACCCTAG AGGCTTCTAT TGCTACAACT 
TACTACACCC AGCCCACCGG AAATTACACT AGATTTTCAA ACTCAATGAT TGGACTTAAA 
TGGCGTTTTT TAGAAGATCA AGAAAATCAT TACGCTCTAG CCGTTAAACC CACTCTCATT 
TTTCCAGCTA GTCAGCAGCA GCAAGTTAAT GGACTAGGAT CTGCAGCCTT GAATTATGGA 
GTCAACTTCA TAGCCTCTCG TTATTGGGAG TCACTTGAAG TGCATGTGAA TCTGTCTTAT 
ATGCATTCAC CCTACAACAC CAATTATGCA GTTGGACAAA GTATGGATCT TAATCGCACC 
AATATACTAT TGATGTCTTT TGCGCCTGTC TTAACACTCT GGCCTGGGGT GAAGGTCGCT 
CTAGACATTG GCGCTACTAC CAACCCACCA ATACCCGAGC AATATTTAAA TACTTACGGG 
CTTGTTGCAC TCATTCTTTC TCCGACTGAA GATATAGATA TTGGCCTTTC AGCTATGAGG 
AGTGCCGCTA ATTATGGGAC GGTTTTATCT GCTAATGACA CCAATGCGAC ACGCACGGAA 
ATCGGTGTGA CTTGGCGTTT TTAA
 
Protein sequence
MKSPIALQLF KYILLLLFLI STSAVAFEPL NTDDAGTVEA GRNQIEQYFF SINRHGNTSA 
TPTDIVTPGE EYSGQDSAKA FPFTYTRGLT KTLEASIATT YYTQPTGNYT RFSNSMIGLK 
WRFLEDQENH YALAVKPTLI FPASQQQQVN GLGSAALNYG VNFIASRYWE SLEVHVNLSY 
MHSPYNTNYA VGQSMDLNRT NILLMSFAPV LTLWPGVKVA LDIGATTNPP IPEQYLNTYG 
LVALILSPTE DIDIGLSAMR SAANYGTVLS ANDTNATRTE IGVTWRF