Gene Pnuc_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1586 
Symbol 
ID5053844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1656141 
End bp1657169 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content44% 
IMG OID640471759 
Productglycosyl transferase, group 1 
Protein accessionYP_001156364 
Protein GI145589767 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.514056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TGATCATCAC TGATGCATGG GACCCACAGG TTAATGGTGT CGTACGAACA 
CTTAAACAAA CCCGTGCTGA ATTAACCGCA ATGGGTCATG AAGTGGAAAT GATTACCCCT 
ACTGGTTTTA AATCAATTCC TTGCCCAACC TATCCAGATA TCGCCCTTTC ACTTTTTCCT 
GGCAAAGAGG TGGCAAGACG CATTAAAGAA TTTGCTCCTG ATGCTATGCA TATAGCTACT 
GAGGGGCCGC TTGGTTTATC AGCTCGTGCC TATGCAGTAA AAAACAACTT ACCTTTTTCT 
ACTGCTTATC ACACTCGCTT TCCCGAATAT GTCAAAGCCC GCACTGGAAT CCCACTTGCA 
ATTACCTATG CGTTTATTCG CTGGTTTCAT GGTCCATCAA TGGCGGTCAT GGCACCAACT 
ATTGTTGTCA AGAATGATCT TGAAGAGTAT GGCCTCAAGA ATGTAGTGCT TTGGTCAAGA 
GGTGTTGATC TTGATATTTT TAAAATTCAA GACTCCAAAG CACTAAACAC TGCGCATCCC 
ATTTTCTTAT ACGTGGGGCG TGTTGCCGTT GAAAAGAATA TCAATGCATT TTTAGAAATT 
GAATTGCCAG GTTCTAAATG GGTAGTAGGC GATGGTCCGG CAATGGCTGC TATCAAAGAA 
AAATACCCTG AAGTAAATTA TTTGGGCGTA CTTCAACAAC ATGAACTAGC AAAAGTGTAT 
GCAGCCGCAG ATGTATTTGT ATTTCCAAGC AAAACAGATA CATTTGGCCT GGTTTTACTT 
GAAGCAATGG CATGCGGCAC ACCAGTGGCG GCATATCCGG TCACCGGCCC TATCGATGTT 
TTGGGCCACT CTAATGCCGG AGCGATGAAT GAAGATTTGC GTGAAGCTTG TATGCAGGCT 
TTAAAAATTC CTCGCGAAGT AGCGCGCGCC CATGCAGAGA AATTCTCCTG GAGAGCTGCT 
TCAGTACAGT TTGCAGATCA CCTCAAGCCA GTATCGACAC CAGAAGTGCA TGTTACTGCG 
CTAGCCTAA
 
Protein sequence
MKIMIITDAW DPQVNGVVRT LKQTRAELTA MGHEVEMITP TGFKSIPCPT YPDIALSLFP 
GKEVARRIKE FAPDAMHIAT EGPLGLSARA YAVKNNLPFS TAYHTRFPEY VKARTGIPLA 
ITYAFIRWFH GPSMAVMAPT IVVKNDLEEY GLKNVVLWSR GVDLDIFKIQ DSKALNTAHP 
IFLYVGRVAV EKNINAFLEI ELPGSKWVVG DGPAMAAIKE KYPEVNYLGV LQQHELAKVY 
AAADVFVFPS KTDTFGLVLL EAMACGTPVA AYPVTGPIDV LGHSNAGAMN EDLREACMQA 
LKIPREVARA HAEKFSWRAA SVQFADHLKP VSTPEVHVTA LA