Gene Pnuc_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1531 
Symbol 
ID5053567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1600599 
End bp1601243 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID640471704 
Productputative lipoprotein 
Protein accessionYP_001156309 
Protein GI145589712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.009595 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA AATCTATTCT TAGCTACGCT ATTGCAGCAT TGTCTGCGGC ATTCATTCTC 
TCTGGATGCC AATCTACTGG CGCGGATGGT AAGCCGCTCA CTCCAGCCGA AATCATTCAG 
AAGCGTGATG CCACTATGCA GATGTCAACA ACTGGCTTAG ATGCTTTGCT GAAGCAGAAG 
CCGGATGTGA AGAAAGAAAT TGATGCAGCT GCAGGCTATG CAGTGTTCGA TACTTCTAAC 
TACAACATCG TTTTATTGGT ACTCGCTCGT GGCGAAGGTG TTCTATTTGA TAAGCGCCGT 
AAAAATCCAA TCTTTATGCA AGCTGTTAAG ACGGGTGAGG GTGTTGGCGC TGGATATCAA 
AAACAATATC AAATTATCAT CTTTAAAAAT ACAACCGCTA TTGATCAATT CTTATTGGCT 
TCTGTTGCAG GACAGCAGGG CGGTGTAGAT GTAGAGGCAA ATTTCTCTGC CGGTTCTGGT 
GGCACCATTC GCTCATTTAA TCCTGAGATT ACCTTCTACA CAGTAGGTCT TTCTGGATAT 
GATTTGCAAG CCAACTACGG TGGCGCGCTA TTTTTGGTTG ATCAGCAATT AAATGATGCG 
GCAACATTAG CAAGCCTTCC CAAGAAAAAG CCAGCAACTA AGTAA
 
Protein sequence
MKFKSILSYA IAALSAAFIL SGCQSTGADG KPLTPAEIIQ KRDATMQMST TGLDALLKQK 
PDVKKEIDAA AGYAVFDTSN YNIVLLVLAR GEGVLFDKRR KNPIFMQAVK TGEGVGAGYQ 
KQYQIIIFKN TTAIDQFLLA SVAGQQGGVD VEANFSAGSG GTIRSFNPEI TFYTVGLSGY 
DLQANYGGAL FLVDQQLNDA ATLASLPKKK PATK