| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1436 |
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| Symbol | |
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| ID | 5053679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1507417 |
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| End bp | 1508241 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471608 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001156214 |
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| Protein GI | 145589617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.934128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCG ATCTCATTAC ATCTAAAGAC AATGCTTTAT TTAAAGAGGT TCGGCTGTTG
CAAGCTACTG GCTCAAAAGG TCAAAAAGCA AGGTTAGCTT GTGGACAAGC CCTACTTGAA
GGTATTCATC TGGTACAAAC ATGGCTAGGG GATCCAGGTC TGAAGATCTT ATTTACCTCT
GAGGTGGGTT TAAAGAATTC TGAAATTGCA CAAGCAGTGT ATTCACATCT CGAGATTTGC
CCAGATACCA AGGTTTATCA ATTAGATAGC GCCCTATGGG ATTTATTAAG TGAACTAGTG
AATGCGCCGC ATCTTGCTGG TTTGCTTGAT CTTCCAAAAT CCAGCTTGGC TCCATCCCAA
TCCATTGCTA CATTGGCGGG TGATGTTGTG ATATTGGATC GCGTGCAAGA TGCTGGCAAT
GTAGGCTCTA TTTTGCGAAC CGCAGCAGCT GCTGGCTTTA CTCAAGTGTT GGCTTTGTCT
GGCTGCGCAC ATCTATGGTC TAACAAAGTC TTGCGCGCCG GTATGGGTGC ACACCGTTTA
TTGGATCTCT ATGAAGGTTG GTCTAACCAA CAAGTGTTGA GTGCTGTAAC GGCACCTCTA
TTGGCCGCCA CTGCAGATGC AAAATGTGAT CTATTTTCTT TAAAGAATGA TTTACTGCAC
CCAGTTGCAT GGGTCATGGG GAGCGAAGGC CAGGGCGTGT CTGAAGATCT CCTGGCTCAA
GCTAAAGGCA TCTCCATTCC TATAGATCCT CGAGTGGAGT CATTAAACGT ATCGACTGCC
GCAGCTATTT GTCTATTTGA GACGGTGCGA GTCAGAAGAG GGTAG
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| Protein sequence | MNFDLITSKD NALFKEVRLL QATGSKGQKA RLACGQALLE GIHLVQTWLG DPGLKILFTS
EVGLKNSEIA QAVYSHLEIC PDTKVYQLDS ALWDLLSELV NAPHLAGLLD LPKSSLAPSQ
SIATLAGDVV ILDRVQDAGN VGSILRTAAA AGFTQVLALS GCAHLWSNKV LRAGMGAHRL
LDLYEGWSNQ QVLSAVTAPL LAATADAKCD LFSLKNDLLH PVAWVMGSEG QGVSEDLLAQ
AKGISIPIDP RVESLNVSTA AAICLFETVR VRRG
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