Gene Pnuc_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1428 
Symbol 
ID5053224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1498448 
End bp1499425 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content43% 
IMG OID640471600 
Producthypothetical protein 
Protein accessionYP_001156206 
Protein GI145589609 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGTC GTACCGCTGA TTGTCTTTAC TGGATGGCCC GTTACACCGA GCGCGCAGAA 
AATACTGCTC GCATGCTGGA TGTGAACCAT CAAACGTCCC TATTGCCACA ACCCACCGAG
TTCTTAGAGC AAAGCTGGAA GAAGCTTCTG ACTATTTCTA AACTAGAAGA TGCTTTTCTC
AGCCAATATG ATGTAGTCAA TCGTGAGAAT GTATTGGATT TCATGATTTA TGAAACTAGC
AATCCCTCAA GCATCGTTTC TTGCTTATAT GCTGCCCGTG AAAATGCGCG CGTCATTCGC
GGAAAAATTA CTTCAGAAGT TTGGGAAACC CAAAATACAA CCTGGCTAGA GCTACAACGA
ATCCTTGAAG CTAGACATCA AGCCGACCCA AGTAGATTAC TTGAATGGGT GAAGCATCGT
TGCCACCTCT TTAGAGGCGT TATGCATGGC ACGATGCTGA AAAACGAAGC TTTCTACTTT
ATTAATATTG GCACCCTGTT AGAGCGTGCC GACAATACCG CACGTATTCT AGAAACTAAG
TATGAGGATC AAGCCTCCCT CAAAGTCTTG AGCTCAAATA AAACCACTGA AGATGGCACC
GATGGTGAAT TCTTTGATTT TTACCATTGG GCAGCTTTAC TTCGCTCTGT TTCCGCCTTT
GAAATTTATC GTCAAATTTA TTCTGATCAA GTAACCCCTA AGCAGGTTGC TCAATTGCTC
ATTTTTAATA AGCAAATGCC TCGCTCATTG GTATGTTGTG TGAACGAATT GATCACCTTG
ATGTCAGAAG TAAAGAATCA ACAATCCAAA GAAATCGAGC GTTTACTAGG CAAGCTAAAG
GCTAGTTTGG ATTACTCTGA TATTGACGAG GTATTCGAAC AAGGCTTGGA AGAGTTCATA
GAGGCTTTCT TAGAGCGCAT TAACCACATC GCCGATGAGT TCAGTAATGC TTATCTCATC
CCATTAGCAG TGGCCTAA
 
Protein sequence
MLSRTADCLY WMARYTERAE NTARMLDVNH QTSLLPQPTE FLEQSWKKLL TISKLEDAFL 
SQYDVVNREN VLDFMIYETS NPSSIVSCLY AARENARVIR GKITSEVWET QNTTWLELQR
ILEARHQADP SRLLEWVKHR CHLFRGVMHG TMLKNEAFYF INIGTLLERA DNTARILETK
YEDQASLKVL SSNKTTEDGT DGEFFDFYHW AALLRSVSAF EIYRQIYSDQ VTPKQVAQLL
IFNKQMPRSL VCCVNELITL MSEVKNQQSK EIERLLGKLK ASLDYSDIDE VFEQGLEEFI
EAFLERINHI ADEFSNAYLI PLAVA