Gene Pnuc_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1397 
Symbol 
ID5052847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1465966 
End bp1466622 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID640471569 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001156175 
Protein GI145589578 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.746759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA TGAAATTTAT CTGTGACACT GAGCGTTGCA TTGAGTGCAA TGGCTGTGTA 
ACTGCTTGTA AGAACGAAAA CGAAGTACCT TGGGGTGTAA ATCGCCGCCG TGTGGTTACA
GTAAATGACG GAATCATTGG TCAAGAAAAA TCAGTTTCAG TTGCTTGTAT GCACTGTACT
GATGCTCCTT GTATGGCTGT ATGTCCAGTA GATTGTTTCT ACCGCACTGA TGAAGGCGTT
GTGTTGCACG ATAAGGATAT CTGTATCGGT TGCGGTTATT GCTCCCTTGC TTGTCCGTTT
GGAGCGCCAC AGTTTGAAAC TAAGGGCGCC TTCGGCACAC GCAGCAAGAT GGATAAATGT
ACCTTCTGTA GTGGTGGCCC AGAGGAGAAT GGTAGCGTTG CAGAGTTTGA GAAATATGGT
CGCAACCGTT TAGCAGAAGG TAAGTTACCC CTTTGTGCTG AAATGTGTTC TACCAAGGCC
TTGATTGGTG GAGATAGTGA AGTGATCTCT AGTATCTTCA ATCAGCGCGT AACCACTCGT
GAGAAAAACG GCAAGTACCC TGGTGGGCAA GCATTTGGCT GGTCTACTGC ATATGGCGGT
CCAGGTACAG CAGAGCCAAC TCCAACACCT GCAGACAAAA TTCCAGGAGC TCAATAA
 
Protein sequence
MARMKFICDT ERCIECNGCV TACKNENEVP WGVNRRRVVT VNDGIIGQEK SVSVACMHCT 
DAPCMAVCPV DCFYRTDEGV VLHDKDICIG CGYCSLACPF GAPQFETKGA FGTRSKMDKC
TFCSGGPEEN GSVAEFEKYG RNRLAEGKLP LCAEMCSTKA LIGGDSEVIS SIFNQRVTTR
EKNGKYPGGQ AFGWSTAYGG PGTAEPTPTP ADKIPGAQ