Gene Pnuc_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1361 
Symbol 
ID5053680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1432391 
End bp1433200 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content44% 
IMG OID640471533 
Productextracellular solute-binding protein 
Protein accessionYP_001156139 
Protein GI145589542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATTTTTCTT TCTTTTTTCG CTCTGTCTAA TTCAATCTAG TTTTAGCCAA 
ACATCGCCCC CTATGAAAAC CATTGATCCC ACCCTCATCT CTTCATTTGC ACCTACCGGA 
ACGTTACGAG TGGGTATTAA CTTAGGCAAT CCTATCCTAG CTAATGAAAA TCCAAATACG 
CATCAGCTCA ATGGCATCAC AATCGATATT GCCCAAGAAA TTGGAAAGCG TATTGGCCTC 
CCTGTGAAGC TAATCCCCTT TAAAACGGCG GGTGCCACAG TAGATGGCGT GAAGTCTGGT 
GAGATTGATT TAGTCTTTGT CGCCATCGAT CCAGTAAGAG GTGCCGATAT CAGCTATACA 
CCGGCATATA TTCAGATTGA AGGCGCCTAT ATGGTGAAGA GCAACTCTCC CATTAAGAAT 
AACGAAGAAG TAGATGCGCC CAATAATGAA ATCGTCGTCG GCAAAGGAAG TGCATATGAT 
CTTTATCTCA CGCGAGAAAT TCAACGGGCC ACACTACTTC GAGTAGCAAG CTCTCAAGCA 
GTAATTGATG ACTTTATGTC GGGCAAAGGC AATGTTGCAG CTGGCGTTAA GCAACAACTA 
GAGAGTGATG CCAAACGATA TCAGGGTTTG CGGATGCTGC CCGGTCGCTT TATGGTGATT 
AACCAAGCAA TTGGCATTCC GAAAGCCCGA GCCAATTATG AGAGTGCTAC CGCTTACTTA 
AGCGAAACCA TTGCTGAATT AAAACAATCT GGATTTGTAG CAGCATCAAT GCAGAAACAT 
CAAATTCAAG GTGCGAAAGT GGCTGAGTAA
 
Protein sequence
MKKIFFFLFS LCLIQSSFSQ TSPPMKTIDP TLISSFAPTG TLRVGINLGN PILANENPNT 
HQLNGITIDI AQEIGKRIGL PVKLIPFKTA GATVDGVKSG EIDLVFVAID PVRGADISYT 
PAYIQIEGAY MVKSNSPIKN NEEVDAPNNE IVVGKGSAYD LYLTREIQRA TLLRVASSQA 
VIDDFMSGKG NVAAGVKQQL ESDAKRYQGL RMLPGRFMVI NQAIGIPKAR ANYESATAYL 
SETIAELKQS GFVAASMQKH QIQGAKVAE