Gene Pnuc_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1326 
Symbol 
ID5053972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1403479 
End bp1404288 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content45% 
IMG OID640471498 
Producthypothetical protein 
Protein accessionYP_001156104 
Protein GI145589507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGC TAGCACCCCC ATCCTTTTTA TTGCCAAGAC GAATTCTGCA GTTAGTCCTG 
GTATCAGGAT GCTTGTTGTT CACTCCCTCA ATCTCTATGG CGGTGTTGCA GGATGAGATT 
CAGGTTTACG ATGATGAGAT CAACGACAAG GGTAAAGCTA GCCTAGAGCT TCATGTAAAC 
AATACCCCAA ACGGAATTCA AACGCCGTCT TATCCTGGTG AAGTTACGAA CAATAACGGT 
ACTCGCGTCA CTCCCGAGTT TGCCTATGGC CTCGGCCATG ATTTAGAGGC CGGGCTCTAT 
ATTGCTTACG TTAACTACAA TAGTAAGTTT CAATATGCCG CAACCAAAGT TCGCATGAAA 
TGGCTTCCGA TACGAGAAGA TAAGGGCGAT AGTTTTTTTG CGGGACTGAA TATTGAACTT 
GCTAACGTTC AGCCGCAATT TGAGGAATCC AGATATAACA GCGAAGCTCG CTTTATTATT 
GGCAAGCACT TTGATGAGTG GTTATTTTCT TTCAATCCCG TTGTTGGGAT GCCGCTTTCA 
CAGCCCTATG TTCATCAATC ACCTTATTAC AGTACGGCCA CACGTTTATC CCGTGAGGTT 
TTACCCGAAT TAGCCTTGGG CGTGGAGTAT TACTCCAATG TCAATCAACT TGGCCAGCCC 
ATTAATTATC AAAATACCCA GCAACTGGGT TTTTTGATGA TGTACTACGA GGGTAACCCC 
ATCTCTTTTC AGGCCGGGGT GGGGAAGGGC TTTTCTAATA GCACTGACTC TCTCACCCTA 
AAAGCAATTT TCTCTATTCC GCTGAACTAG
 
Protein sequence
MQKLAPPSFL LPRRILQLVL VSGCLLFTPS ISMAVLQDEI QVYDDEINDK GKASLELHVN 
NTPNGIQTPS YPGEVTNNNG TRVTPEFAYG LGHDLEAGLY IAYVNYNSKF QYAATKVRMK 
WLPIREDKGD SFFAGLNIEL ANVQPQFEES RYNSEARFII GKHFDEWLFS FNPVVGMPLS 
QPYVHQSPYY STATRLSREV LPELALGVEY YSNVNQLGQP INYQNTQQLG FLMMYYEGNP 
ISFQAGVGKG FSNSTDSLTL KAIFSIPLN