| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1288 |
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| Symbol | |
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| ID | 5052147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1359390 |
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| End bp | 1360556 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471460 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001156066 |
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| Protein GI | 145589469 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.38604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTACAG GGATAAAGGC GATGAAGCGT TTACCAAAAA TACTGTGCAG TACTTTATTG
ATTGGTACTG CTGCACTTGC TTTAGTAGCA TGCTCTGGAA ATTCACGGGT ACGTCAACCA
GCAGCTTTGG TCCCAGTCTC TAATCAGTTT GATTTACAGC CTGTTTGGTC TACTAGTATT
GGCTCCTCAG AGCCCTATAA CTTTCATCCT GTAGTGGCTG GAGATGCTGT ATACGTTGCT
TCACACAGTG GCAATCTAGC GAAGATCAAT TTGCAGTCAG GCGCCAAGGC ATGGGAAGTT
TCTGTTCCAG AAAATCTGGC TGTTGGTCCG GGATCCGATG GTCGAACCAC AGTCGCTGTA
ACCACAAAGG GCCTTGTTTA TGCCTATGAC GACACCGGTA AACCGTTATG GAATGTCGGT
GTAGGTAGCG AAGTCTTAAG TGAGCCTGTA GTTGCTTCTG GCATTGTGGT GATTCGCACT
CTAGACAATC GATTTGTTGG CTTAGATGCC CAAACGGGTG CGCGTAAATG GATTTACCAG
CGCCAACAAT CTGCTCTCTC ATTACGAGTT GGATATGGCA TGCTGCCAAT CAACAATGAA
GTGATTGTGA CTGGTTTTGC TGGTGGACGT TTTGGCATGA TCGCGATTGC CAATGGCGGA
TTGATTTGGG AAACACCGGT ATCTTTCCCT AAAGGATTTT CAGAAATTGA ACGCTTAAAT
GATGTGTCTG CTAGACCTAG CATGGAAGGC GACACATTGT GTGCAGTGTC TTATCAAGGG
CGAATTGGTT GTGCCCAAGC GCGTACCGGC AATCTTTTGT GGTTTAAGGA TTATTCAAGT
TATACCGGAA CCGCTCAAAG TCCTGAGCTT GTATTTTCAG CCAATGAAAA ATCGTATGTC
ACCGCTTTTG CAACCAAAGA TGGCACTCAG GTCTGGGAAA ACGTTCAGAT GACTTTCCGC
GATGTGGGTG AACCGCTCGC AATTGGCAAG GTATTACTCA TGGGTGATGC GCAAGGTTAC
GTGCATGCAC TTTCACAGGC GGATGGCAAG ATGCTTGCGC GTATCCGTCA CGATAGCAGT
CCAATCACAG CCGCCCCGAT TGCAGTAGGC GGTCTCATCT TGATTCAATC TCAAGGTGGA
AAAATAGCGG CGTACAGTCC AAAATGA
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| Protein sequence | MTTGIKAMKR LPKILCSTLL IGTAALALVA CSGNSRVRQP AALVPVSNQF DLQPVWSTSI
GSSEPYNFHP VVAGDAVYVA SHSGNLAKIN LQSGAKAWEV SVPENLAVGP GSDGRTTVAV
TTKGLVYAYD DTGKPLWNVG VGSEVLSEPV VASGIVVIRT LDNRFVGLDA QTGARKWIYQ
RQQSALSLRV GYGMLPINNE VIVTGFAGGR FGMIAIANGG LIWETPVSFP KGFSEIERLN
DVSARPSMEG DTLCAVSYQG RIGCAQARTG NLLWFKDYSS YTGTAQSPEL VFSANEKSYV
TAFATKDGTQ VWENVQMTFR DVGEPLAIGK VLLMGDAQGY VHALSQADGK MLARIRHDSS
PITAAPIAVG GLILIQSQGG KIAAYSPK
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