| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1247 |
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| Symbol | |
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| ID | 5053219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1311517 |
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| End bp | 1313238 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471419 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001156026 |
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| Protein GI | 145589429 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.417513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTT CCTTTACCCT TCGTTATGCA CTCCTTAGCT TGGTTTTAGC TATATTCGCC
TATTGCTACG GCTTGGATAG CCGCTTTGCC CCTAAAAACG GTGATGAATA TCCTTACATG
CATATCGTGA GGATGACTGC AGATTCAGGC CATTGGTTGC CACTGCAATC ACAGATGGAT
GGCATCAAAA ATACGAAGCC ACCATTAATC TTTTGGCAGG GTATAGCTAG TACTTATTGG
GCAAGCGATT GGACTTTATT CAATTTACGT TGGCCTAGCG TTCTCTATAC AGCGCTGACC
TCATTTTTTT TATTTTTAGC GGTTCGACGA TTTAGCGGTA AAACGCACAC TGGATTGTTG
GCTGGATTAG TCTGGCTCTC CTTTTTTGCG ACCTACCGTT ATGGGCGCCC ATTTCTTACT
GACCCTCCTG AGGTTTTCTG GATTAGCCTG CCATTTTTTG CATTACTGTA TTGGGGTAAA
TGCGCGTTTG AATCTAAATT ATTTTTTCCT GTTCTAGCAG GACTTTGTTT TGGTTTAGCA
CTCTTTGCAA AATCATTTGC TTATATTGTT CCGGCCACTG TTGCTTTAGG TTTGTACTTT
TGGTATTGGC GCGATTGGAG TATTAAAAAA GTTCTTACAC TTGATCTTTA CAAGCTGCTC
ATGATTGGCA TCTTGGCTTT AGGCGTTTTT AGCCTTTGGT TTGCTCTAGA CCCACAGCCT
GAGGCTGTTT GGAAGGAGTT TGTCTTGGGT GAGAATGCCG GAAAATTTGC AGCACGTAGC
TCAAATTACT TGCTCGATTT AGTGCGAGGT GGCGATAGTA TCTGGATGTT GCTTCTCACG
ACGTTAACTA ATGCAGGCCT CTTTTCATTC GTGCTTCTAT CGACTTTGAT TCAAGCATGG
CGTGAGCGCC GTTTTTTATC TGCGCAAGAA GTCCTTCTAT TTTTATTGAT CGGCGCTTTC
TTATTGGTAT TTAGTTTGCC TAGTCAGCGT TCAGGTCGTT ATCTATTACC GGTGATGCCA
GCATTTGCTG CTGTAATTGC ACTGCACTGG GAGCGCTTGC CCTTGTGGGG ATTTCGGATT
GCGTTGATTT TGCAATTTGT CGTCTTAGCA GTCTTAACGT ACTTAGGAGC TAATTTAGAA
TTCTCCAAAT TTGCAGTCGA TTCAGTAGCT TGGACATATT CTTACGCGCA CTGGATATTG
ATGGGGGCGG CTTTAATAGT CACTGTTCTT GGCTTAGCAA GACCACAGCA GTGCAAGGCC
TTCGCTCTCA TGAGCTGTTT CCTGCTCTAT TGCGCATTAA CGAGCAGTTT AAGCCCTCTA
GAGGGTCAGT TGGGACGTTA CTCTGCTCAG ACTATTACTC AAGTAAAGGA CAAGGATATC
TGGATTCCCT GTGACTATCG CGCTAAAGAT GAAGAGTACG GATTACTATT ACCAGGGGCT
CATCTTCATG GCTACTTAGC TAAGGACGCC GGTAATGTCG GTGAACTCAT TGGCACTTAT
CCTGTGGTGG CCGTTCACTC GCCATTGGGG GTAAAGCCCG AAATCTGTGA GTCTTGCCAA
ATTGTGGGTC AACGCATGGA AATGCGTGCC CGCCATTCTG ATGAAGAGAT TAAATTAATG
CTGCAAGGTC AGATAGGCGA ACATCTTTTT GTTACTGAGT ATTTAATTTC TACTCCCGTA
TCAAATCCTG AGTTACTGAA TGTGAAGGAT GTCTGTAGAT GA
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| Protein sequence | MRSSFTLRYA LLSLVLAIFA YCYGLDSRFA PKNGDEYPYM HIVRMTADSG HWLPLQSQMD
GIKNTKPPLI FWQGIASTYW ASDWTLFNLR WPSVLYTALT SFFLFLAVRR FSGKTHTGLL
AGLVWLSFFA TYRYGRPFLT DPPEVFWISL PFFALLYWGK CAFESKLFFP VLAGLCFGLA
LFAKSFAYIV PATVALGLYF WYWRDWSIKK VLTLDLYKLL MIGILALGVF SLWFALDPQP
EAVWKEFVLG ENAGKFAARS SNYLLDLVRG GDSIWMLLLT TLTNAGLFSF VLLSTLIQAW
RERRFLSAQE VLLFLLIGAF LLVFSLPSQR SGRYLLPVMP AFAAVIALHW ERLPLWGFRI
ALILQFVVLA VLTYLGANLE FSKFAVDSVA WTYSYAHWIL MGAALIVTVL GLARPQQCKA
FALMSCFLLY CALTSSLSPL EGQLGRYSAQ TITQVKDKDI WIPCDYRAKD EEYGLLLPGA
HLHGYLAKDA GNVGELIGTY PVVAVHSPLG VKPEICESCQ IVGQRMEMRA RHSDEEIKLM
LQGQIGEHLF VTEYLISTPV SNPELLNVKD VCR
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