Gene Pnuc_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1216 
Symbol 
ID5051955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1271214 
End bp1271651 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID640471388 
Productcupin 2 domain-containing protein 
Protein accessionYP_001155995 
Protein GI145589398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.365458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAC CAGAAAAGCT TAAAAGTGAT ACCCATTTTT CTCATATAAA ACCAGCAGAT 
ACACAGTTTC TACCTGGCGG CTTGAGGGAT TTCTTTTTAT ATCGTGATCT TGGCGTCGCT 
AAGGCCACTA ATGGCAAGGT AATTGCTCAT CTGGTAAAGG CAAACAAGCC CCCAGTTGAT 
GGAACCGGTT GGCATTACCA TGTGGCCGAT TTTCAAATCG TCATCATGAA TAAAGGTTGG 
GCGAAATTCA TGTACGAAGA TAAGGTTACA TTGGTAGAGG CCGGCGATGT AGTGCATCAG 
ATGCCGGGTA TTACCCATTA CCTATTTGAT TACTCGCCAG ATATGGAGTA CTTAGAAATC 
GTTGGCCCTG CTGACTTTGG AAGTGTGCCC GTATCAGTCG GCCCAGCAGA AGTTCCTGGA 
GTTACTCCAT GGAAGTAA
 
Protein sequence
MNAPEKLKSD THFSHIKPAD TQFLPGGLRD FFLYRDLGVA KATNGKVIAH LVKANKPPVD 
GTGWHYHVAD FQIVIMNKGW AKFMYEDKVT LVEAGDVVHQ MPGITHYLFD YSPDMEYLEI 
VGPADFGSVP VSVGPAEVPG VTPWK