| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1214 |
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| Symbol | |
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| ID | 5051972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1269674 |
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| End bp | 1270888 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471386 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001155993 |
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| Protein GI | 145589396 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.302913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGG CATACCAAAC ATTTGCCAAT TTGCATAACC CAGTTCGTCT TTTTGCTAGG
GCGTCAGAGC GAGTCTCCAA TAATTGGTTT GGAAATTTCG CCCTAAATCC CATGCAACGG
TTGGCTGCTC ATTATGAGCA AATTTCATTG CTGGGTTTTA CGCATACTCG ACCAGATTTT
AAAATTCATT CTGTCTTGGA TTCGTTTGGG GTAGAGCAAG CGGTATCTGA AGACCTTATC
TATTCAACCC ATTTTTGCAA TCTTGTACGA TTTTCTAAGT CCGGCGTAGA AGGTCAACCA
AAAATTTTGC TTGTTGCCCC CATGTCTGGT CACTTTGCAA CTTTATTAGC AGGTACCATT
AAGACCTTGC TGCGCGATCA TGATGTGTAT GTAACAGACT GGCTCAATAT CCGAGACATT
CCATTGAGTT GTGGTGAGTT TGATTTTGAT TCTTATGTTG AGCACATCAT TAACTTTTTA
CAAGTGATTG GACCCCAAAC CCATTTGATG GCGGTCTGTC AGCCCACGGT TGCTTGCTTA
GCGGCAACGG CGATTATGTC CGAGGATAAA AGCCCCTATG CTCCAGCTAG TCTGATTCTG
ATGGCAGGGC CCGTCGATGT TAGTCAAAGC CCTACCAAAG TGAATGAGTT GGCTACAAGT
AAACCGATAT CCTGGTTTGA AGAAAAGTTG ATAGGTGTGA TTCCACGGCA ATTTAATGGT
ACTGGGCGTA AGGTCTACCC AGGATTTTTG CAATTAATGG CATTCATGAG TATGAATCCC
GAGAGGCATG CGGATTCATT TAAAAAGCTC TATGAATATC GTATTAACGG TGAAACTGAA
AAAGCAGATG TCATTCATGA TTTTTATGAA GAGTACTTTG CCATTATGGA TTTGTCAGGG
CCGTTTTATC TTGAAACGAT TCAAAAGGTA TTCATGGATC GTGATCTCGC AGTAGGAAAA
TTAACCTATC AAGGTCGTTT AGTGAATCCT AAATTGATCA AGAAAACTTT CTTGCTCACT
GTAGAGGGGG AGCGGGATGA CATTTGCGGT ATTGGCCAAA CCCTGGCTGC ACAAGATCTT
TGCAGTGGTC TCCCTGGTTA TATGAAATCC CATCATTTGC AGGCCGGCGT AGGTCACTAT
GGTGTATTTA ATGGCAAACG CTGGGATACC CAGATTTATC CCGTAGTTCG TAATCATATT
CAGTCGGCTC TTTAG
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| Protein sequence | MYKAYQTFAN LHNPVRLFAR ASERVSNNWF GNFALNPMQR LAAHYEQISL LGFTHTRPDF
KIHSVLDSFG VEQAVSEDLI YSTHFCNLVR FSKSGVEGQP KILLVAPMSG HFATLLAGTI
KTLLRDHDVY VTDWLNIRDI PLSCGEFDFD SYVEHIINFL QVIGPQTHLM AVCQPTVACL
AATAIMSEDK SPYAPASLIL MAGPVDVSQS PTKVNELATS KPISWFEEKL IGVIPRQFNG
TGRKVYPGFL QLMAFMSMNP ERHADSFKKL YEYRINGETE KADVIHDFYE EYFAIMDLSG
PFYLETIQKV FMDRDLAVGK LTYQGRLVNP KLIKKTFLLT VEGERDDICG IGQTLAAQDL
CSGLPGYMKS HHLQAGVGHY GVFNGKRWDT QIYPVVRNHI QSAL
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