Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1184 |
Symbol | |
ID | 5052441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1242878 |
End bp | 1244056 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471357 |
Product | amidase |
Protein accession | YP_001155964 |
Protein GI | 145589367 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.190673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCACAA TTTTTAAACG CGATACAGCC CGAGCCTTTT GTGTAGATGC TCCGATAGAG ATACTTTCGA CAAAATCAGG TCCGCTAAAA GATTTAACCT TTGGGGTAAA GGATATTTTT GACATTGCCA ATATACCAAC AGCATTTGGG AGCCCTGCCT GGCTGAACTC CCATCCCATT CCTACTGAGA CGGCTACATT TATCTCAAGC CTTGTAGATG CTGGCGCATC ATTAGTTGGG AAGACTCATA CTGACGAACT AACCTATAGC ATTCTAGGAA TGAATGCGCA TTACGGTACA CCCTTAAATA CTGTCGCCCC CAACAGAGTT CCAGGAGGAT CTTCTAGCGG ATCAGCATCT GCAGTTGCTG CTAACCTAGT TGACTTTGCT ATAGGCTCAG ATACTGGGGG TTCTGTTAGA GCTCCGGCTA GCTTCTGCGG TATATATGGT TTCCGCCCTA CACATGGGCG TATTAGCCTT GAGAGAGCTC GTCCACTAGC AAAAAGTTTC GATACTTTAG GTTGGTTTGC ACGAGATCCA GAAATCCTCT TGAAGGTGGG AGAAGTTCTT TTTAATGAAA GTCGGACAAG GAACGCCAGC GCATCCTACT TTTTCTTAAA AGAGGCATTT GACTTATTAC CCCCCAGCCT TAGCAAACAG GCACAAGAAG CTATCTCACT CCGACTGGGA AGAACTCAAA TTCCTACCGT TGAGATCGGC AACTGCGAGC TCAAAGATTG GGCAGAGACA TTTAGAATTA TTCAAGCTGG AGAAATCTGG GAACAGCATG GTAATTGGGC ATCCGAACAT CTCAGCGAGA TGGGGCCTGG AGTCAAAGAT CGCTTTGAGG CTGCGCGCTC TATCACTGAG GATCAAAAAA TTAAAGCTCG TTCTGACCGA GAAAAAGTCA TTGCCAAGAT GGCTCAACTG CTTTCCGAAA ATACTTATCT AATACTTCCC ACTGTTTTTG ATATAGCGCC ACGCTTGGAC TCAAGCGCAA AAGAATTTGA TGACTTTAGA AAAAATAGTT TTCAATTGCT TTGTATCGCT GGCCTATGTG GCCTCCCACA AGTAACACTA CCCTTGCTTA CCATTCAAGA TGCACCATTT GGAGTATCCA TCCTAGCCAA GCAAAATATG GACATGTCAC TTTTAGGTGA AATCTATGCA CCAACATGA
|
Protein sequence | MPTIFKRDTA RAFCVDAPIE ILSTKSGPLK DLTFGVKDIF DIANIPTAFG SPAWLNSHPI PTETATFISS LVDAGASLVG KTHTDELTYS ILGMNAHYGT PLNTVAPNRV PGGSSSGSAS AVAANLVDFA IGSDTGGSVR APASFCGIYG FRPTHGRISL ERARPLAKSF DTLGWFARDP EILLKVGEVL FNESRTRNAS ASYFFLKEAF DLLPPSLSKQ AQEAISLRLG RTQIPTVEIG NCELKDWAET FRIIQAGEIW EQHGNWASEH LSEMGPGVKD RFEAARSITE DQKIKARSDR EKVIAKMAQL LSENTYLILP TVFDIAPRLD SSAKEFDDFR KNSFQLLCIA GLCGLPQVTL PLLTIQDAPF GVSILAKQNM DMSLLGEIYA PT
|
| |