Gene Pnuc_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1128 
Symbol 
ID5052527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1174448 
End bp1175782 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content50% 
IMG OID640471298 
Producthypothetical protein 
Protein accessionYP_001155908 
Protein GI145589311 
COG category 
COG ID 
TIGRFAM ID[TIGR01547] phage terminase, large subunit, PBSX family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.225312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTA TCTGGGCACC ATTGCCCGGT AGCCAGACAC TATTTCTGAC ATGCCCTGTG 
TACGAGGTAT TGCTTGAAGG CACCAGAGGA GGGGGCAAGA CCGACACCTT GCTCATGAGC 
TATGCCCAAC ATGTAGGTAG AGGCTTTGGG GATCACTGGC GCGGCACACT CTTTCGCCTC 
ACCTATCCAC AATTGGCTGA CGTAGTGGCC AAGAGCAGGC GCTGGTTCTA TCAAATCTTC 
CCAGGCGCCA AGTTCAATGA ATCTGACTAT GTGTGGAAGT GGCCCACAGG AGAGATGCTG 
TACTTTCGTT ATGGTGCCAA TGAGGATGAC TACTGGAATT ACCACGGCCA TGAATACCCT 
TGGCTAGGAT TTGAAGAGCT GACCAACTGG CGAAACCTCT CTTTTTACGA AGCCATGCAT 
TCCACCTGCA GGTCATCTCA CCCTGGAATG CCGAGGATGG TGAGGGCTAC CTGCAATCCA 
TTTGGGGTGG GCCACGCATC CGTAAAGGAG CGATTTCAGA TTGGAGCTAT TCCTGCAGGG 
CAGATCATTA GGCAGGAGGG CGCATTACCC AGAGTGCGAA TTCACTCGAC TATCTATGAG 
AACACCCACC TTCTCAAAAA CGACCCGAAC TACCTGATGA GTCTAGAGTC GCTAAGCGAT 
CCAAACAGAC GCAGAGCCTG GCTAGAAGGT GATTGGGATA TCCACGTGGG AAGCTTCTTA 
GAAGGCGTAT GGCAGCCCTC TAAGCACGTT GTAGAACCCT TCGCAATTCC ACCGACATGG 
AAGGTCTGGC GCTCAATGGA TTGGGGTTAT GCCAGACCTT ATGCCGTTTA TTGGTTTGCC 
TTATCAAATG ATGGAGTCTA TTACCTATGG AGAGAACTCT ATGGATATGG AGATAAAGAA 
AATACGGGCA CTAGGGAAGA TGCAACGGTA GTAGCGGAGA AGATCAAAAA GATCGAGATA 
CACGACCAAC GTCTTGGCTA TGAATACCGC ATGAACCTAG CTGATCCATC CATCTTTTCA 
AAGATAGGTG CAGAGCGGTC AATAGGTCAG ATCTTTAGAG ATAAAGGGGT GAAATGGACC 
GAGGCCTATA ACGCATCAAG AAGCCGAGTA AATGGGGCTC AGGAAATCAT CCGGCTACTA 
GCTGAGGACA GACTCAAGAT CTTCTCAACC TGTAAGCATT GGCTTAGAAC CATCCCTCAG 
TTGCCACCAG ATTCATTAAA TCCGGAGGAC GTAGATACCG ATGCAGAAGA TCATGCTTGG 
GATGCGACGA GGTATGGGGT TATGAGAGCC AGGCAAATAC CTGAAAGTGA TTCGCTCTAT 
GGATTGAGGG GTTAA
 
Protein sequence
MKTIWAPLPG SQTLFLTCPV YEVLLEGTRG GGKTDTLLMS YAQHVGRGFG DHWRGTLFRL 
TYPQLADVVA KSRRWFYQIF PGAKFNESDY VWKWPTGEML YFRYGANEDD YWNYHGHEYP 
WLGFEELTNW RNLSFYEAMH STCRSSHPGM PRMVRATCNP FGVGHASVKE RFQIGAIPAG 
QIIRQEGALP RVRIHSTIYE NTHLLKNDPN YLMSLESLSD PNRRRAWLEG DWDIHVGSFL 
EGVWQPSKHV VEPFAIPPTW KVWRSMDWGY ARPYAVYWFA LSNDGVYYLW RELYGYGDKE 
NTGTREDATV VAEKIKKIEI HDQRLGYEYR MNLADPSIFS KIGAERSIGQ IFRDKGVKWT 
EAYNASRSRV NGAQEIIRLL AEDRLKIFST CKHWLRTIPQ LPPDSLNPED VDTDAEDHAW 
DATRYGVMRA RQIPESDSLY GLRG