Gene Pnuc_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1052 
Symbol 
ID5052034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1056012 
End bp1056356 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content50% 
IMG OID640471220 
Productpreprotein translocase, SecG subunit 
Protein accessionYP_001155832 
Protein GI145589235 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1314] Preprotein translocase subunit SecG 
TIGRFAM ID[TIGR00810] protein translocase, SecG subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATGGA TTAAAACTTT ATTAATAGTT TTGCAGGTGA TTTCAGCTTT GTCTGTGATC 
TTGCTGGTAT TGCTGCAACA GGGTAAGGGC GCTGATATGG GTGCTGCCTT CGGATCGGGA
GCATCAGGTA GCTTGTTTGG CGCCAGCGGT TCAGCCAACT TCCTGTCTCA TGCAACAGCT
ATCTTTGCGG CGGTGTTTTT CATGTGCACC ATCGGAATTA CCTGGGTTGG CAATAAAAAA
GAAGTAAACC CTGGAGTTCT ATCTGGAACG GTAGCTCCGG CTGCAACTCC AGCGGCTCCA
GTGGCTCCGG CTCAGGATCC AAGCAAACCT GCAGTTCCTA GATAA
 
Protein sequence
MEWIKTLLIV LQVISALSVI LLVLLQQGKG ADMGAAFGSG ASGSLFGASG SANFLSHATA 
IFAAVFFMCT IGITWVGNKK EVNPGVLSGT VAPAATPAAP VAPAQDPSKP AVPR