| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1040 |
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| Symbol | |
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| ID | 5052266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1044235 |
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| End bp | 1046292 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471207 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_001155820 |
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| Protein GI | 145589223 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTGA CCTTAAATAT TCCCGTTCTC TGCGCGATTC CACTGGCACC ATTAATTGGT
TCAATGATTG CCGGCTTCTT TGGTACTAAG CTTGGCGGTA ACCGCATAGG GCACGGAGCA
TGTCAGTTCG TAACCATCTT GGGCGTAATG ATTGCCTTTG TTCTTTCTTG CAATGTTTTA
GTGCAAGTCA TGGATGGTTT TTATTTCAAT GGTACGGTCT ATCGCTGGAT GCAACTGGGT
GAGCTCAATT TAGATATTGG CTTCTTAATT GATCCTTTGA CTGCAACCAT GATGTGTGTT
GTGACCTTTG TGTCTTTGAT GGTTCACATC TATACGATTG GCTATATGAA GGGTGAGGAG
GGTTATAACC GCTTCTTCTC ATACATCTCT TTATTTACCT TTGCCATGTT GATGTTGGTA
ATGAGTAACA ACCTTCTTCA GCTCTTCTTT GGCTGGGAGG CTGTTGGGGT TGTTTCTTAT
TTATTGATTG GCTTTTATTT CGAACGTCAA TCAGCAGTGT TTGCCAATAT GAAGGCCTTC
TTGGTTAACC GTGTTGGTGA CTTTGGCTTC ATTTTAGGAA TTGGTTTGCT ACTGGCAAGT
ACTGGCTCCA TGCAATATGA CGTCATCTTT TCTCAAAATA CCGCTTTAGC TGCGCAAACA
TTGCCCGGCA CAAGCTGGAA TTTAATGACG GTTATTTGCA TTTGTTTATT TATTGGCGCG
ATGGGTAAAT CAGCTCAATT CCCACTGCAT GTTTGGTTGC CAGACTCAAT GGAAGGCCCA
ACGCCGATTT CTGCATTAAT TCATGCTGCG ACGATGGTTA CAGCAGGTAT TTTTATGGTG
TCACGGATGT CGCCACTGTT TGAGCTCTCT GACGTTGCAC TCAGCTTTAT TTTGGTCATT
GGATCAATCA CGGCTTTATT TATGGGCTTT TTGGGCATCG TACAAAACGA CATCAAACGC
GTTGTCGCAT ACTCAACCCT GTCTCAGCTT GGTTATATGA CGATCGCCTT AGGAGTCTCT
GCATATCCAG TGGCAATCTT TCATTTAATG ACCCATGCTT TCTTTAAGGC CTTACTGTTC
CTTGCTGCTG GTAGTGTCAT TCTGGGTATG CATCATGAAC AAGACATGCG CAAGATGGGT
GGTCTCTGGA AGTACATGCC AATTACTTGC TTGATGATGC TTTTAGGTAA TCTGGCTTTG
ATCGGTACAC CATTCTTCTC TGGTTTCTAT TCCAAGGACT CAATTATTGA AGCAGTAGCT
GCAAGTGATA TTCCAGGATC TGGTTTTGCT TACTTCGCTG TGATGGCTAG TGTTTTTGTA
ACAGCTTTGT ATTCTTTCCG CCTGTACTTC TGGGTATTCC ACGGTAAGGC GCGTTGGGGT
CATGCCGATG CTCATGCACA CGATCATCAC CAGCATCCTG AGCAGGGCGA TGATCATGCG
CATCATGGTT TAGCTCCTGG TCAAAAGCCT CATGAGTCCC CAATTGTGGT GACATTGCCA
TTGATCTTAT TGGCGATACC TTCCGTCATC ATTGGCTTTT ACACCATTAG CCCGCTCTTG
TTTGGTACTT ATTTTGGCGA CTCTATCTTT ATTGATCTTG CGCGCCATCC AGTCATGAAA
GATTTGGCGG AAGAGTTTCA TGGTCCAGTG GCAATGGCAA TTCATGCATT TACATCACCA
GTGTTGTTGC TAGTTGCCCT GGGTGTTCTT ACTGCTGCCA TTGGATATCT GTGGGCTCCT
AAATTGCCAG CGAAATTTGC AGAGGCATTT GCGCCAATCA AAAAATTGCT TGATAACAAA
TACTACTTAG ATGATTTCAA TCAGGCCGTA TTTGCTAAGG GTCTTATTTG GATTGGTAGT
TTCTTGTGGC ATCGCGGCGA TCAGAAGGTG ATTGACGGGT TCTTTGTTAA CGGCAGTGCG
CACGCAGTAG GGCGCTTTGC TGGTGTGATT CGCCATTTGC AATCCGGCTA TCTCTATCAC
TATGCTTTCG CAATGATTGC GGGCTTAGCG GTTTTGTTGG CTTGGGTTTT GTACGCTTAC
CTGCCTTTTG TTCGCTAG
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| Protein sequence | MQLTLNIPVL CAIPLAPLIG SMIAGFFGTK LGGNRIGHGA CQFVTILGVM IAFVLSCNVL
VQVMDGFYFN GTVYRWMQLG ELNLDIGFLI DPLTATMMCV VTFVSLMVHI YTIGYMKGEE
GYNRFFSYIS LFTFAMLMLV MSNNLLQLFF GWEAVGVVSY LLIGFYFERQ SAVFANMKAF
LVNRVGDFGF ILGIGLLLAS TGSMQYDVIF SQNTALAAQT LPGTSWNLMT VICICLFIGA
MGKSAQFPLH VWLPDSMEGP TPISALIHAA TMVTAGIFMV SRMSPLFELS DVALSFILVI
GSITALFMGF LGIVQNDIKR VVAYSTLSQL GYMTIALGVS AYPVAIFHLM THAFFKALLF
LAAGSVILGM HHEQDMRKMG GLWKYMPITC LMMLLGNLAL IGTPFFSGFY SKDSIIEAVA
ASDIPGSGFA YFAVMASVFV TALYSFRLYF WVFHGKARWG HADAHAHDHH QHPEQGDDHA
HHGLAPGQKP HESPIVVTLP LILLAIPSVI IGFYTISPLL FGTYFGDSIF IDLARHPVMK
DLAEEFHGPV AMAIHAFTSP VLLLVALGVL TAAIGYLWAP KLPAKFAEAF APIKKLLDNK
YYLDDFNQAV FAKGLIWIGS FLWHRGDQKV IDGFFVNGSA HAVGRFAGVI RHLQSGYLYH
YAFAMIAGLA VLLAWVLYAY LPFVR
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