| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1010 |
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| Symbol | |
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| ID | 5053129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1006641 |
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| End bp | 1008728 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471177 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001155790 |
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| Protein GI | 145589193 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGA ATGTATTGAA GCACCTCTCT GTTTTAGTTT TTGCTGCCGT GATGTTTTGC
AGATCTGTCT CTGCTCAAGA TATTGCTGCA TCAGACATAC CAACATTAAA TGTCACCGGT
AATCGCGATG ATGGCCAAGG CTTTCTATCA CCTAACAAAA TCATTGCTGG CGATGAATTG
CAAGGTAAAT TGAGCGGCAC CTTGGGTGCA ACCCTTTCAA ATGAATTGGG CATATCAGCT
ACTGGTTATG GTGCGGGCGC TTCTAGACCC GTCATACGAG GATTAGACGG TGCACGAGTA
CAGATTCTGC AAAATGGTTT GGCTGCTGGG GATGTCTCCA GTATTTCTGC AGATCATGCG
GTTGCTAGTC CTATGCAAAA TACCCATCAA ATTGAGATAT TACGGGGTGC AGCCGCTCTG
CAGTATGGCT CAGGTTCCAG TGGTGGACTA GTAAACGTGG TGAATGATCG CATTGTGACT
TCAATGCCTG ATACGCTCTC AGGCGCAGTT AATACCAGCT ATGAAACAGT AAACCAAAAC
AAAACAGCCA ATATTGAATT AGATGCCCCA GCTGGTCCCT TGGCGTTACA TGTAGATTCT
GCTATCAGCA ACTCTAACAA CTATCGTATT CCTGGGTTTG CTGAGCAAGG AGGCCCCAAT
GCCAATTGGG CTATCAATCC CGGTAATCCA GTCAACATTC CATACAGTGG AAAGCTACCC
TTTTCTTATA GCGATGAAAA TAGCTTGGGA GTGGGTGCAA GCTATATTAG ATCCGATGGA
TATACAGGCC TATCAATGGA GCGCCTGAAC CATAACTATG GAATCCCTAC CTCTGAAGGT
GGTTTTATTC AGCAGTCCCA AAACCGCTAT GACTTAGCGC ATCAAACGAA TGATCCCTTT
GATGGCTTTT CTTCAGTCAA AATCAGTGCT GCAAATACAA ACTATCAACA CACTGAGTTT
ACGAATAATG GAGTTGCTTC TACTCAGTGG AATAACACCG CAACTGAAGC AAGATTGGAA
TTAGCGCATA AAGCATTGCT AGGGTCAAAA GGAGTAATCG GCGCTCAAAT TACTGGCGCA
ACATTAAATG CCACGGATTT AACTACTAAT AACTACGCAA TCGTTCCTCA AACTAAATCA
AACTCAACAG CCCTATTTGT AGTGGAAGAA GGGCGTTACG GCCCTTTAAA AACGAGTTTG
GGGGCACGTT ATAACTATGC ATCTCAAAAT CCGAATTCAA GCACTCAATT TCCAAGTCAA
AGTTCTCAAG AATTTACTCC CAACACCTAC GGCCCGCCTA CTATTCAGAA CCGGCAGTTC
AATTTAATGT CCTACTCTGC TGGGGGAATG TTGGATATTA CAAGTGGGTA TGGGCTTGGC
TTAGCCTATA CAGTGTCACA AAGGGCGCCA TCCCCTCAAG AACTGTATTC CTATGGCCCG
CACGATTCAA CGGCAACATT TGATATTGGT AACTCCAATC TAGGAACTGA AACTTCACAC
AATCTTGAGC TTAGCTTGCA AAAAACAGTA GGCTTGATGC GCGGCAAGGC CAGCATTTAT
CGGAATCAGT TCTCTAATTA CATCTATGGT TTTTATACAG GCTCTTACAG CCAGGCTAAT
GAGAATTTCT CTGTAGTGCA AGCCTCTCAG GCTAACGCCA ATATCCAAGG CGCTGAAGGT
GAGATTACTT ACAACTGGAG TCAAACAGGG GTTGGTGGAC GTGTATTTGG AGATGTCTCT
CAAGGCACAT TTACTTCTGG TGGAAATTTA CCCTTACAGC CGGCCCCTCG TCTGGGTACA
GAGTTAGCAT ATCAACGTAA TGGTTGGCTC ACTAGCGCGA CTTACATCTA TAGCTTTCAG
CAAAATAGAC TTGCTAGCTG GGAAATAGGA CCTACGCCCA GCTATAACCT ACTCAACGCG
AATTTATCTT ACACAGAACG AATTGGAAAG GTGAACTGGA CCGCTTATAT GGCCCTTAAG
AATCTCTTAA ATGAAGACAT TCGTTATGCT ACTTCCCCAA TGTCCGTTAG ACTCTATGCC
CCGCAGCCTG GCAGAAGCCT CATGGTCGGC TTGAGAGCAG CCTTTTGA
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| Protein sequence | MNMNVLKHLS VLVFAAVMFC RSVSAQDIAA SDIPTLNVTG NRDDGQGFLS PNKIIAGDEL
QGKLSGTLGA TLSNELGISA TGYGAGASRP VIRGLDGARV QILQNGLAAG DVSSISADHA
VASPMQNTHQ IEILRGAAAL QYGSGSSGGL VNVVNDRIVT SMPDTLSGAV NTSYETVNQN
KTANIELDAP AGPLALHVDS AISNSNNYRI PGFAEQGGPN ANWAINPGNP VNIPYSGKLP
FSYSDENSLG VGASYIRSDG YTGLSMERLN HNYGIPTSEG GFIQQSQNRY DLAHQTNDPF
DGFSSVKISA ANTNYQHTEF TNNGVASTQW NNTATEARLE LAHKALLGSK GVIGAQITGA
TLNATDLTTN NYAIVPQTKS NSTALFVVEE GRYGPLKTSL GARYNYASQN PNSSTQFPSQ
SSQEFTPNTY GPPTIQNRQF NLMSYSAGGM LDITSGYGLG LAYTVSQRAP SPQELYSYGP
HDSTATFDIG NSNLGTETSH NLELSLQKTV GLMRGKASIY RNQFSNYIYG FYTGSYSQAN
ENFSVVQASQ ANANIQGAEG EITYNWSQTG VGGRVFGDVS QGTFTSGGNL PLQPAPRLGT
ELAYQRNGWL TSATYIYSFQ QNRLASWEIG PTPSYNLLNA NLSYTERIGK VNWTAYMALK
NLLNEDIRYA TSPMSVRLYA PQPGRSLMVG LRAAF
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