Gene Pnuc_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0995 
Symbol 
ID5052833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp990350 
End bp991213 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID640471160 
Productnitrate ABC transporter, ATPase subunits C and D 
Protein accessionYP_001155775 
Protein GI145589178 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID[TIGR01184] nitrate transport ATP-binding subunits C and D 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATTG AAAATACATT CCTCAAAGTT TCAAACCTCA GCAAGTCGTA TAAAGCTGAC 
GCACCTCCAG TATTTGAAGG AATAGATTTT GAAATCGAAA AAGGAGAGTT TGTTTGTATC
ATCGGCCATT CCGGATGTGG CAAAACTACT ATTTTGAATG TGCTTGCTGG TCTTGAAGAA
GCAACTGGCG GCAATGCCAT CATGCTTGGT AAGCGTATTC AGGGCCCTGG TTTAGAGCGT
GGAGTTGTAT TCCAAGGGCA TGCATTAATG CCGTGGATGA CAGTACTGCA GAATGTGGCT
TTTGCAGTGA AGTCAAAGTA TCCCGATTGG TCAAAAGAGC AGATTACTGA GCATTCCAAA
AAGTATCTAG CAATGGTCGG CTTGGTAAAT GCTGAAAATA AAAAACCATC TGAATTATCT
GGCGGTATGA AGCAAAGGGT TGGTATTGCA AGAGCCTTTG CAATTGAGCC AAAAATGCTA
CTACTTGATG AACCATTCGG AGCCTTGGAT GCGTTAACTC GTGGGGTTAT TCAGGATGAG
CTACTCAAAA TTTGCAAAGA AACAAATCAA ACTGTATTTA TGATCACCCA CGATGTTGAT
GAGGCAATCT TGCTTTCTGA CAAAATTATG CTGATGAGCA ACGGCCCTAA TGCACGTATC
GCTGAAATCG TTGTCAACAC TTTGCCCAAA GGAAGAAAGC GGGCCAATTT ACATCATGAT
GCTATGTATT ACCCAATGCG AAACCATTTA GTAGATTTTC TAGTCAATCG ATCAAAGGAT
CTGCAGGTAA AAGGAGCTAA GGGTGAGTTG GATGGTTACA AGCCTGTAAT AGTGCTTCCA
GGTGTTGATG CGGTTGTTGC TTAA
 
Protein sequence
MQIENTFLKV SNLSKSYKAD APPVFEGIDF EIEKGEFVCI IGHSGCGKTT ILNVLAGLEE 
ATGGNAIMLG KRIQGPGLER GVVFQGHALM PWMTVLQNVA FAVKSKYPDW SKEQITEHSK
KYLAMVGLVN AENKKPSELS GGMKQRVGIA RAFAIEPKML LLDEPFGALD ALTRGVIQDE
LLKICKETNQ TVFMITHDVD EAILLSDKIM LMSNGPNARI AEIVVNTLPK GRKRANLHHD
AMYYPMRNHL VDFLVNRSKD LQVKGAKGEL DGYKPVIVLP GVDAVVA