Gene Pnuc_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0850 
Symbol 
ID5052305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp844761 
End bp845993 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content47% 
IMG OID640471009 
Productcupin 4 family protein 
Protein accessionYP_001155632 
Protein GI145589035 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAT TTTACTTGAG CAAACCCTAT CAGCCACCGC AAGCCCCTCA AAACCTGCCA 
TTAAACGTAC CCTGGGCATT ATTTGGCGGT ATTAGTCCCG AACAGTTTAT GAAGCAGTAC 
TGGCATAAGA AGCCTTTACT GATTCGTGGA GCTATACCTG CATTTTCCCT AACCAATCAA 
AATGGGGAAG CTTTAGAGAG CCCCATCTCC TTTCCGGAGC TAGCAGAATT ATCGACTCAA 
GATACTGTTG AGTCTCGTCT CATTCGCTCT AAACCATGGA GTTTTGACCA TGGTCCATTT 
GCAAAAAAAT CCATCCCTGC TATTAACAAG CCCAATTGGA CTTTATTGTT GCAGGGCATG 
GAAGCTCACC ATCCAGCTGC AGCAAAAATA CTATCGTGGT TTCGTTTCAT CCCCGATGCC 
CGTTTAGATG ACCTCATGAT TAGCGTTGCA GGTATAGGCG GTGGCGTTGG ACCGCACTTT 
GATTCATACG ATGTGTTCCT CATGCAAATG TCAGGAAGAA GGCATTGGCA TATTTCTGAG 
CAAAAAGACT TAAGCCTGAA TCCAAAGTTA CCGTTAAAAA TATTGCAGCA CTTTCGCTCT 
GAGCAGGACT GGATTCTTGA GCCAGGCGAC ATGCTTTATC TCCCCCCTCA CGTTGCTCAT 
GATGGGATTG CACTAGATGC CGGTTGCCAA ACTTGGTCTA TTGGATTTCG CTCCCCAAGT 
TTTAAAGAGC TGCTCCAAGA AGGCCTATGG CGTTTAGCGG AGTCCCTCGA AAATCTGCCA 
GAATTGGAGC AGAAGTTTGC CGATCCAAAG CAAGAAGCCA CCGCAAGCGC TGAACAGCTG 
CCAGACGAGC TTATCGCCCA ATTAAAGGGC CAACTGCACA AATTGAAGCT AGACCAAATA 
GATAGCTTCT TGCCCGGAAT AACAGCCTAC CTCTCCGAAC CTAAGCAACA AGCCATTTTT 
GATGGCCCAA ATAGCCCATT AAAACCCAAA GCTTTCTTAG CTCGCCTAAG CAGGGAGAAT 
CTCCTTCCGC ACCCTCAAAC CCGCATTTTG AGCCTTGGTA AGCAAGTTTT TTGCAACGGG 
GAAAGCATGA CTCAAGACCA AGGACCGAGG ATTGGGGATG CTTGGAGATC CCTCTCAGCC 
CAAAAGAGGT TACGCACTAA ATCCCTTCAA AATATTGATA AAAGTAGCCT CTATGAAGCA 
TACCTGTCGG GCTGGCTCAT TTTTGAAGAA TGA
 
Protein sequence
MSSFYLSKPY QPPQAPQNLP LNVPWALFGG ISPEQFMKQY WHKKPLLIRG AIPAFSLTNQ 
NGEALESPIS FPELAELSTQ DTVESRLIRS KPWSFDHGPF AKKSIPAINK PNWTLLLQGM 
EAHHPAAAKI LSWFRFIPDA RLDDLMISVA GIGGGVGPHF DSYDVFLMQM SGRRHWHISE 
QKDLSLNPKL PLKILQHFRS EQDWILEPGD MLYLPPHVAH DGIALDAGCQ TWSIGFRSPS 
FKELLQEGLW RLAESLENLP ELEQKFADPK QEATASAEQL PDELIAQLKG QLHKLKLDQI 
DSFLPGITAY LSEPKQQAIF DGPNSPLKPK AFLARLSREN LLPHPQTRIL SLGKQVFCNG 
ESMTQDQGPR IGDAWRSLSA QKRLRTKSLQ NIDKSSLYEA YLSGWLIFEE