Gene Pnuc_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0839 
Symbol 
ID5052959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp832022 
End bp832717 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content42% 
IMG OID640470998 
ProductDNA binding domain-containing protein 
Protein accessionYP_001155621 
Protein GI145589024 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA TTACCTCAGA AATGGAATAC CTCAGTACTC GACAAAGCGC CAAGATACTG 
CAGGTATCCC TAGGTACAGT TCAAAAAATG GTTGAATTAG GCGAATTAAT TGCCTGGAAA 
ACCAGGGGTG GCCATAGACG TATCCTGGCA AGCTCACTTG AGCAACAGCT TCAAAGAAGA 
AAAAGGGCTA TGCGTCAAAA GACAACTCAA AACTGTATAG CCATGGGTAT ATTCAGAAGA 
TCAGAAAATA GCGAGGAGTT GCTTCAATCC ATTCAAGACT GGCAGTTAAA AGTGGAGATG 
GAGGTAGCGG TAGATAGCCT TGAGGGGTTA ATGAAAACGG TATCAATTGC CCCGGACCTG 
ATTTTCTTGG ATGCCTTAAT ACCTCCGGTT GAGCAGGTTC ATATAATACA TTATCTGAGC 
AAAAACAAGG ACACACAGCG CATACCTATT CTAGTAGATG AAGGATTTAT CAAACTACAT 
CCAGGTGTGG TGACTCTTGC TGATGAAAAT AATGGCAACC GACCTCAATT AACCGAATGC 
ATTAAAAAAG AGTTGGAAAA TGGGCTTATT GACTTAAATC CGCTCATTAT TGGCTATCCT 
GCAACCAATC CTGATTTAGA TACCAATCTT CAAGGCAGTC GTCTGGAGTT GCTAGAACCT 
CTTTTCATAG AGGCCTTGGC CAGAAAGTGC GCATAA
 
Protein sequence
MKSITSEMEY LSTRQSAKIL QVSLGTVQKM VELGELIAWK TRGGHRRILA SSLEQQLQRR 
KRAMRQKTTQ NCIAMGIFRR SENSEELLQS IQDWQLKVEM EVAVDSLEGL MKTVSIAPDL 
IFLDALIPPV EQVHIIHYLS KNKDTQRIPI LVDEGFIKLH PGVVTLADEN NGNRPQLTEC 
IKKELENGLI DLNPLIIGYP ATNPDLDTNL QGSRLELLEP LFIEALARKC A