Gene Pnuc_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0822 
Symbol 
ID5052431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp814474 
End bp815646 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content44% 
IMG OID640470979 
Producthypothetical protein 
Protein accessionYP_001155604 
Protein GI145589007 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.295229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGATT CTGAGCAGTT CCATTTAGAA ATCCTTGATC ATCTATCGGA TGTAACTGCC 
GCTGACTGGA ATGCTTTACT TGGCCCTGAC TCGGGCCCTT TTCTAAAGTA TGAATTTTTA
AGCGCACTCG AGAAAACTGG ATGTGTTGGC GGTAATACTG GGTGGCAAGC TGCCCATCTG
GTATTAAAAA AAGCAAACCA ACTAGTAGGT GCAATGCCTT TGTACTTAAA GCAACACTCC
TACGGTGAAT TTGTCTTTGA TTGGTCTTGG GCACAAGCCT ACGAACAGCA AGGCTTGAAT
TACTACCCCA AGATTCTTGG CGCAATTCCA TTTACACCTG TCCAGGGTTC ACGCATTCTA
TTCCTTGCTG GTTTAAATAA AGCTGAAATT CAGAATGCAT TAATTAAAGG TCTTAAATCA
TTGCTAATAG AGAATGATCT GTCCTCTGCA CATGTTCTAT TTCCAACAAC TGGGGAGGTA
GAGCAACTAA AGGGGCATGG CTTCTTATTA AGAGACTCCG TACAGTTTCA TTGGCATAAC
CAAGGCTTTC AAAATTTTGA ACAATTTTTG GCGGCTCTCA CCATGAAGCG CCGTAAAAAT
ATTCGCCGCG AGCGTGAGCA GGTAGCAAGA GAAGCTATCT CGTTTAAACA TGTGTCCGGC
AAAGCCTCTA CCGATGAAGA TTGGGAATTC TTTTTTGATT GTTATCAGAA TACTTATCTT
GAGCATCAGT CTAGCCCTTA TCTCAGCGAA GCATTCTTTA AGTTGTGGGT ACGGCAGATG
CCAGAAAATT TACATCTGAT CTTGGCTCAA CGAGATGGCA TTTCAATTGC TGCATCCTTG
ATCGTAGTAG ATCGCGAATC ATCGAAAGCC TATGGAAGGT ATTGGGGTGC TCTTGAACGT
GTTCCTTGCT TACACTTCGA GACCGCATAC TACCAAGCCA TCGAGTATTG CATTAAGGAG
GGGATTCAGA CTTTTGAGGG TGGCGCTCAA GGCGAGCATA AGATGGCGCG TGGATTTTTA
CCCACCACTA TTCAATCAGC CCATTACATT AAAGACCCCA GATTTTCAAA GGCAATTGAA
CACTTCTTGC AACGCGAACA CCAAGGCATT GGGGCCTACG TTGATGAGCT CGCCGAGCAT
AGTCCGCTGA AATCGACTAA AGTACCCACA TGA
 
Protein sequence
MTDSEQFHLE ILDHLSDVTA ADWNALLGPD SGPFLKYEFL SALEKTGCVG GNTGWQAAHL 
VLKKANQLVG AMPLYLKQHS YGEFVFDWSW AQAYEQQGLN YYPKILGAIP FTPVQGSRIL
FLAGLNKAEI QNALIKGLKS LLIENDLSSA HVLFPTTGEV EQLKGHGFLL RDSVQFHWHN
QGFQNFEQFL AALTMKRRKN IRREREQVAR EAISFKHVSG KASTDEDWEF FFDCYQNTYL
EHQSSPYLSE AFFKLWVRQM PENLHLILAQ RDGISIAASL IVVDRESSKA YGRYWGALER
VPCLHFETAY YQAIEYCIKE GIQTFEGGAQ GEHKMARGFL PTTIQSAHYI KDPRFSKAIE
HFLQREHQGI GAYVDELAEH SPLKSTKVPT