| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0803 |
|---|
| Symbol | |
|---|
| ID | 5052613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 798335 |
|---|
| End bp | 798787 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640470960 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_001155585 |
|---|
| Protein GI | 145588988 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5501] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGC AGCGACGCAG TTTATTAAAG TATTCAGCCG TTTTTGGCTT GATGGCTTCT
GCAGGCCTCA TTAGTGTGGC TCAAGCACAA GAGTGGAACA AAGCCGCTTT TGAGGGCAAA
GGTTTAGATG ATGTATTCAA AATATTGGGT GCTGGCAGCC CTGATAAATC AGCTGCCGTT
ACCTTAAATG CTCCGGATAT CGCCGAAAAT GGCGCGGTTG TTCCTGTAGG CATTACAACC
ACGCTCAAGG CTGAACAAAT GGCTATCCTG GTTGAAAAGA ATCCTAGCGC TTTGGCTGCT
CAATTCTTTA TTCCTGCTGG CACAGAGCCA TTCATTACTA CGCGTATAAA GATGGGTCAA
ACTTCCAATG TATATGCTTT AGTTAAAGCG GATGGTAAAT GGAGTATGGC TGTTAAGGAA
GTCAAAGTAA CTTTGGGCGG ATGTGGCGGT TAA
|
|---|
| Protein sequence | MNQQRRSLLK YSAVFGLMAS AGLISVAQAQ EWNKAAFEGK GLDDVFKILG AGSPDKSAAV
TLNAPDIAEN GAVVPVGITT TLKAEQMAIL VEKNPSALAA QFFIPAGTEP FITTRIKMGQ
TSNVYALVKA DGKWSMAVKE VKVTLGGCGG
|
|---|
| |