| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0656 |
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| Symbol | |
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| ID | 5053185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 647501 |
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| End bp | 648478 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470810 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001155438 |
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| Protein GI | 145588841 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAA CCCTGAATTC TTCCTCATCT AACGCCACCC CAGCCGCCCC AGAGCGCTTA
GTTATAGCCT CACGGGAGAG CCGACTAGCC ATGTGGCAGG CTGAGCATGT CCGAGATTGC
CTTAAATCAC TCTATCCACA GTGCGATGTG CAGATTCTGG GTATGACCAC CCGTGGCGAC
CAAATATTGG ATAGAGCCCT GTCTAAGGTC GGAGGGAAGG GCTTATTTGT AAAAGAATTG
GAAACAGCTC TAGAAGACGG GCGCGCACAT TTAGCGGTGC ATTCCCTGAA AGATGTGCCG
ATGGTCATGC CAGAGGGATT TGATTTGGCA TGTGTCATGG CTAGAGAGGA TGCGCGAGAT
GCCTTTGTCT CCAATGACTA TGCAAGCCTT GAGGAATTGC CTAAAGGGGC TGTGGTGGGA
ACCTCAAGTT TGCGTCGCGA AGCCGTTCTC AGAGCAAAGT TTCCTCATTT AGAAGTGCAT
CCATTGCGGG GTAATTTGGA TACTCGTATG GGTAAGTTAG ATCGCGGCGA ATATCAAGCC
ATCATTTTGG CAGCAGCCGG ATTAAAACGT TTGGGTTTAG AAAGTCGTAT TCGTGCTTAT
CTTCCTTATG ACCCATATAC CCCTGCAGCT GGACAAGGTG CGTTAGGTAT TGAAACGCTT
AGCAAGCATC CCAGCATTAA ACATTGGCTT GCGCCATTAA ATGATTTACC AACCTTACTA
GCAGTATCTG CTGAGCGTAT GGTCTCGCGC CAATTGGGTG GTTCTTGCGA AGTGCCATTG
GCAGCCCACG CAGTGTGGGA TAACAATCAA ATGAACATTC GTTCTTTTGT TGCCAGCGTT
GATGGTAAAG CGATTTGTCT TGCCGATGGA GTAGGGCAAG TTCATACAAT TGAAGAAGCT
GAAGCATTAG GTCTTGCCGT TGCACAGGAT TTATTGGCGC AAGGCGCAGC AGACTTAATT
CCGCATATTC CGAAGTAA
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| Protein sequence | MSQTLNSSSS NATPAAPERL VIASRESRLA MWQAEHVRDC LKSLYPQCDV QILGMTTRGD
QILDRALSKV GGKGLFVKEL ETALEDGRAH LAVHSLKDVP MVMPEGFDLA CVMAREDARD
AFVSNDYASL EELPKGAVVG TSSLRREAVL RAKFPHLEVH PLRGNLDTRM GKLDRGEYQA
IILAAAGLKR LGLESRIRAY LPYDPYTPAA GQGALGIETL SKHPSIKHWL APLNDLPTLL
AVSAERMVSR QLGGSCEVPL AAHAVWDNNQ MNIRSFVASV DGKAICLADG VGQVHTIEEA
EALGLAVAQD LLAQGAADLI PHIPK
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