| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0637 |
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| Symbol | |
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| ID | 5052404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 627311 |
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| End bp | 629020 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470791 |
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| Product | putative oxalyl-CoA decarboxylase |
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| Protein accession | YP_001155419 |
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| Protein GI | 145588822 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03254] oxalyl-CoA decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAG ATAACCAAAA CACACAACTA ACAGACGGCT TTCACCTTGT TATTGACGCC
CTCAAAGCAA ATGATCTCGA TACCATTTTC GGTCTCGTTG GTATTCCTAT TACTGACTTA
TGCCGTTTAG CGCAAGCTGA AGGTTTACGT TTTATTGGTT TCCGTCACGA ACAGCACGCA
GGTAATGCTG CAGCGATTGC TGGCTACATG ACACAAAAGC CTGGCATTTG CATGACTGTT
TCTGCACCAG GCTTCTTGAA TGGTTTAACA GCGCTGGCTA ACGCCACTGT CAATTGCTTC
CCAATGATTT TGATTTCAGG TTCAAGCGAG CGTGAAATCG TTGACTTGCA GCAAGGTGAC
TACGAAGAGA TGGATCAGCT CAATGCAGCT AAGCCATATT GCAAAGCGGC TTATCGTATC
AATCACATTG AAGATATTGG TATTGGTTTT GCTCGTGCGA TTCGCGCTGC AGTTTCTGGT
CGTCCAGGCG GTGTTTATTT AGACTTGCCA GCTCAGTTAC TCGCTCAAAC AATGCCTGTT
GAAGAAGCTA AGAAGTCTAT TTTCAAAGTA ATTGATCCAG TTCCACGTCA AATTCCAGCG
GCTGATGCAG TTGCTCGTGC GTTGGATGTA CTGAAGGGCG CTAAGCGTCC ATTAATTCTC
TTGGGCAAAG GCGCTGCTTA TGCTCAGGCT GATAAAGAGA TTCGTGACTT GATCGAAAAA
TCAGGTATCC CTTATTTGCC AATGTCGATG GCAAAAGGAT TGTTGCCAGA TAATCATCCG
CAGTCTGCTT CTGCAGCGCG TTCATTCGTA TTGGCTGAAG CTGATTCAGT GTTGTTGATT
GGCGCACGTT TGAATTGGTT GCTTTCACAC GGTAAAGGCA AGACTTGGGG TAAAGATCCG
AAGAAATTTA TTCAAATTGA TATTCAAGCA AATGAAGTGG ATAGCAACGT ACAAATCGCT
GCCCCATTGA TTGGTGATAT CGGTTCATGC GTCGGTGAAC TCTTGAAAGG TATCTCTGCG
GTGCCTAAGC CGAGTGCTGA GTGGATTGCT GCAATCACTG AGAAGAAAGA CAAGAACACT
GCGAAGATGG CAGAGACATT GGCTAAAGAA GCAAACCCAA TGAACTTCCA TGGCGCCTTA
CGTGTAATTC GTGATGTGAT CAAGAAGAAC CCAGACGTGA ACTTAGTCAA TGAAGGGGCA
AATACTCTGG ACTATTGCCG TGCAATTGTT GACATGTACA AGCCACGCAA ACGCTTTGAC
TCCGGCACAT GGGGCATTAT GGGTATTGGT ATGGGCTACG CCATTGGCGC CGCAGTTACC
AGTGGTCTGC CTACAGTTGC AGTAGAGGGC GATAGCGCAT TTGGCTTTAG CGGTATGGAA
TTAGAAACAG TTTGCCGTTA CAACCTGCCA ATTACTACCG TTGTATTTAA TAACAACGGT
GTGTACCGTG GTACTGACGT AAATCCAACG GGTGGTGCAG ATGTTGCGCC GACTGTATTC
GTTAAAGATG CCCGTTACGA CAAGATGATT GAGGCATTTG GTGGCGTGGG TTACTACGTT
ACTACTCCAG CAGAATTAGA AGCAGCGTTA ACAGAAGCGA TTGCTGCCGG TAAACCAGCC
CTCATCAATG CTGTTATTGA TGAAACTGCA GGTACTGAGA GTGGACGTTT AACGAACTTA
AACCCATCCA CAGCAGCTGC TAAGAAATAA
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| Protein sequence | MTTDNQNTQL TDGFHLVIDA LKANDLDTIF GLVGIPITDL CRLAQAEGLR FIGFRHEQHA
GNAAAIAGYM TQKPGICMTV SAPGFLNGLT ALANATVNCF PMILISGSSE REIVDLQQGD
YEEMDQLNAA KPYCKAAYRI NHIEDIGIGF ARAIRAAVSG RPGGVYLDLP AQLLAQTMPV
EEAKKSIFKV IDPVPRQIPA ADAVARALDV LKGAKRPLIL LGKGAAYAQA DKEIRDLIEK
SGIPYLPMSM AKGLLPDNHP QSASAARSFV LAEADSVLLI GARLNWLLSH GKGKTWGKDP
KKFIQIDIQA NEVDSNVQIA APLIGDIGSC VGELLKGISA VPKPSAEWIA AITEKKDKNT
AKMAETLAKE ANPMNFHGAL RVIRDVIKKN PDVNLVNEGA NTLDYCRAIV DMYKPRKRFD
SGTWGIMGIG MGYAIGAAVT SGLPTVAVEG DSAFGFSGME LETVCRYNLP ITTVVFNNNG
VYRGTDVNPT GGADVAPTVF VKDARYDKMI EAFGGVGYYV TTPAELEAAL TEAIAAGKPA
LINAVIDETA GTESGRLTNL NPSTAAAKK
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