| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0528 |
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| Symbol | |
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| ID | 5052299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 518644 |
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| End bp | 519726 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470682 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001155312 |
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| Protein GI | 145588715 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGAC GCTCATTTTT AAAGAAGGCC ACTATTGGTG CTGGAGTTGC TGCGATTGGC
GCACCAGCCA TTGCGCAGAG CTTGCCAACC CTCAATTGGC GCTTGGTCTC TAGCTTTCCT
AAATCCTTAG ATACTTTGTA CGGCACCCCA GAAGTATTTG CCAACGCCTT GCGCAAAGCA
ACTGATGGCA AGTTCAATGT CAAAGTATTT GCAGCCGGTG AGGTGGTCCC AGCCCTCCAG
GTATTAGATG CTGTGCAAAA CGGTACAGTG GAGTGTGGAC ATACCGCTAG TTATTACTAC
CTCGGCAAAA ATAGCGCCTT TATTTTTGAT ACCGCCGCTC CCTTTGGCAT GACTGCCCGC
CAACAATCGG CATGGATGCT ACATGGCAAT GGGATGAAAT TAATGCGTGA GCTGTATGCC
ACCTACAATA TTGTGAATTT CTTAGGCGGT CAGACTGGTA CTCAAATGGG TGGATGGTTT
CGCAAAGAAA TTAAATCACC CGAAGATTTA AAAGGATTGA AATTCCGCAT TGCTGGTTTC
GCAGGGCAAG TGCTCGCCAA GTTGGGCGTG GTTCCCCAGC AATTACCGGC TGGAGAAATT
TATTCGGCCT TAGAAAAAGG TACGATCGAT GCTGCAGAAT TTGTCGGACC ATATGACGAC
GAGAAATTGG GGCTAGCAAA GGTTGCCAAA AACTACTATT ACCCTGCATT TTGGGAAGGT
GCCGCAGCCC TTTCTTTCTT GGTAAATAAA AAGCAGTGGG AATCTTTACC GCCAGCATAT
CAAGCAGCTT GGGAGGCCGC TTGCTTTGAG GCGCACACCG ATATGTGCGC TAAATATGAT
GCCCTTAACC CACCAGCACT CCAGCGACTG ATTCAAAATG GAGCGGTATT ACGTAAATTC
AATACCTCGG TGATGGATGC CTGCTTCAAA GCAAGTCAAG AAACCTACGC TGAAGAATCT
GCAAAAAATC CCCAGTTTAA AAAGATCTTT GACGACTATC GTGTCTTTAG AAACATGGAG
GCCCAATGGT TTGGTTTAGC AGAACAAGCC TTTGCTCAAT ACAGTTTTGC CAAAAAATTA
TGA
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| Protein sequence | MQRRSFLKKA TIGAGVAAIG APAIAQSLPT LNWRLVSSFP KSLDTLYGTP EVFANALRKA
TDGKFNVKVF AAGEVVPALQ VLDAVQNGTV ECGHTASYYY LGKNSAFIFD TAAPFGMTAR
QQSAWMLHGN GMKLMRELYA TYNIVNFLGG QTGTQMGGWF RKEIKSPEDL KGLKFRIAGF
AGQVLAKLGV VPQQLPAGEI YSALEKGTID AAEFVGPYDD EKLGLAKVAK NYYYPAFWEG
AAALSFLVNK KQWESLPPAY QAAWEAACFE AHTDMCAKYD ALNPPALQRL IQNGAVLRKF
NTSVMDACFK ASQETYAEES AKNPQFKKIF DDYRVFRNME AQWFGLAEQA FAQYSFAKKL
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