| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0504 |
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| Symbol | |
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| ID | 5053473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 496683 |
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| End bp | 497645 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470658 |
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| Product | rfaE bifunctional protein |
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| Protein accession | YP_001155288 |
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| Protein GI | 145588691 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.79493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTGG GCGACATAAT TAAGAGCATA CAAATGGAAA AAGCAAACCG CGAACAGTTT
TCTAAAACAC GCCTGCTGGT AGTGGGTGAT GTCATGCTCG ATCGTTATTG GTTTGGTGAT
ACCAGTCGTA TTTCACCTGA GGCGCCCGTG CCGGTTGTTC AAGTTGGCAA GATTGATGAG
CGTTTAGGTG GCGCAGCAAA CGTAGCTCGT AACGTCGCCG CTTTAGGGGC TCAAACCACT
ATTCTTGGTG TGGTTGGTAA TGATGAACCA GGTAAGCGGG TCGCAGAGCT CCTTAAATCA
GGCGGTGTTG ATAGTCAGTT GGAAATTGAT GCAGATGTAC CTACCATCGT CAAATTGCGT
GTGATTGCAA GGCAACAACA GTTAATTCGT TTGGATTTTG AAGAGACCCC CAGTGAAAAA
GCGTTAGCTC ATAAGTTAGA GCGTTTTGAA AAATTAGTGG GAACTGCTGA TGTAGTCATC
CTCTCTGATT ACGGTAAGGG TGCCTTAGGT CAAGTAGCTC ACATGATTGA GCAAGCACGG
GCACAGAACA AAATTATCTT GGTTGATCCC AAGGGTGAGG ATTATGAGAA GTATCGTGGG
GCTACCGTAT TAACGCCGAA TCGTAGTGAG CTGCGTCAGG TCGTAGGCCA ATGGTCAAGC
GAAGAAGACT TAACTAACAA AGCTCAGGCC CTCAGAAAAT CTCTTAATTT AGAGGCGCTC
CTTTTGACGC GTTCCGAAGA AGGGATGAGT TTATATACTG AGGCTGGTGT GAGCCATGTA
AAAGCGCAAG CGCGCGAAGT GTTTGACGTA TCCGGCGCTG GCGATACTGT TATTGCTACT
CTTGCTGTTG CTGTAGCGGC TAAATGGCCC CTAGAGAAGG CAATGGCTTT GGCTAATCGT
GCAGGCGGCA TTGTGGTTGG TAAGTTGGGA ACCGCAACCA TTACTTCTGA GGAATTACAG
TGA
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| Protein sequence | MALGDIIKSI QMEKANREQF SKTRLLVVGD VMLDRYWFGD TSRISPEAPV PVVQVGKIDE
RLGGAANVAR NVAALGAQTT ILGVVGNDEP GKRVAELLKS GGVDSQLEID ADVPTIVKLR
VIARQQQLIR LDFEETPSEK ALAHKLERFE KLVGTADVVI LSDYGKGALG QVAHMIEQAR
AQNKIILVDP KGEDYEKYRG ATVLTPNRSE LRQVVGQWSS EEDLTNKAQA LRKSLNLEAL
LLTRSEEGMS LYTEAGVSHV KAQAREVFDV SGAGDTVIAT LAVAVAAKWP LEKAMALANR
AGGIVVGKLG TATITSEELQ
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