Gene Pnuc_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0494 
Symbol 
ID5052454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp485572 
End bp486669 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content45% 
IMG OID640470648 
Productphosphoserine aminotransferase 
Protein accessionYP_001155278 
Protein GI145588681 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000536248 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTG ACCGCCGCAT ATTCAATTTC GCAGCGGGGC CTGCTACTTT GCCTGAAGAG 
GTATTGAAGC AGGCTGCCGA TGAGATGCTT AATTGGCGTG GTCTTGGTAC TAGCGTGATG 
GAAATTAGTC ATCGTAGTAA AGAGTTTATG GAAGTGTATG AAGAAGTCAT TCACGACTTA 
CGCACTCTCA TGAATATTCC AGATGCCTAC GAAATCTTGC TCTTGCAAGG CGGGGGTCTG 
GGACAGAATG CTGCGATTCC AATGAACTTA ATGCCTTTGG CTAAGAATGG ACCTAAGGCA 
GACTATATCG TTACCGGTAT CTGGTCTGAG AAATCATTTA AAGAAGCACA GAAGTATGGG 
GTCGCTAATT TAGTAGCATC TTCTGCTGCA GAAAAGTTCA ACACAATTCC TGCAAAATCT 
AGTTGGCAGC TCTCCAATGA TGCTGCCTAT GTTCTTTATT GCGCTAACGA AACTATTGGT 
GGCGTTGAGT TCCCAGATGT ACCCGATGTG GGAAATACTC CACTAGTGGC AGATATTTCT 
AGCAACATTC TTTCTAAAGA AATGGATGTT ACGAAATGCG CCGTTTGGTT CGGTGGTGCG 
CAGAAAAATA TTGGCCCATC TGGCGTGACG ATTGTGATCG TTCGTAAGGA CTTCATTGGT 
CATAGCATGG GCATTACGCC AACGATTTGG GATTGGTCTG TGCAAGCGAA CACCCAATCG 
ATGATTAATA CACCCCCGAC TTTCTCAATC TACATGGCTG GTCTAGGCTT TAAGTGGCTG 
TTAAAGCAAG GTGGCGTAAA GGTGATTGAA AAACGCAACC AAGAAAAAGC AGATTTGCTC 
TACAGCTTCT TGGACCAAAG CAGTTTGTAT GAAAACCGCG TCACTAAAGA ATATCGCTCG 
CGTATGAACG TGACATTCTT CTTAAAAGAT GAGAACCTAA ACACAGAGTT TTTGGCTCAG 
TCTAATGCTG CTGGTTTAGT GGCTTTGCGT GGTCATAAGG CTGCAGGTGG TATGCGTGCG 
AGCATCTATA ACGCCATGCC TATTGAAGGT GTAAAAGCCT TAATCGAATT TATGCGTGAC 
TTTGAAAGGC GAGCTTAA
 
Protein sequence
MTFDRRIFNF AAGPATLPEE VLKQAADEML NWRGLGTSVM EISHRSKEFM EVYEEVIHDL 
RTLMNIPDAY EILLLQGGGL GQNAAIPMNL MPLAKNGPKA DYIVTGIWSE KSFKEAQKYG 
VANLVASSAA EKFNTIPAKS SWQLSNDAAY VLYCANETIG GVEFPDVPDV GNTPLVADIS 
SNILSKEMDV TKCAVWFGGA QKNIGPSGVT IVIVRKDFIG HSMGITPTIW DWSVQANTQS 
MINTPPTFSI YMAGLGFKWL LKQGGVKVIE KRNQEKADLL YSFLDQSSLY ENRVTKEYRS 
RMNVTFFLKD ENLNTEFLAQ SNAAGLVALR GHKAAGGMRA SIYNAMPIEG VKALIEFMRD 
FERRA