| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0486 |
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| Symbol | |
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| ID | 5052784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 475695 |
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| End bp | 476246 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470639 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001155270 |
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| Protein GI | 145588673 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAAC GTTTAATTCC ATATCAGCCA ATGGATTTGG CAGAACCCGC AGAATTGGTT
GCCGCGATTC GCAAGAGACG CGGCGGCCAA TTTATTAATT TAGATCGGAT GCTTTTACAT
AGCGTTCCGA TTGCAGAGGG CTGGAATCAT TTTATTGGTG AGATCCGTAA TAATTTATCT
CTAGATCCAA AATTACGTGA GTTAGCGATG TGCGGTGTTG CTGTTCTGAA TGGCGCTGAA
TATGAATTTT TTCATCATGC ACCACCATTT AAAAAGGCTG GCGGTACTGA AGAGCAGGTT
CAAGGGTTGC GTTTGATAGG TCAAGCCACG TTTCCTAGGC AATTGTTTTC ACAAGTTGAG
AACGATGCTG CGGATTTAAC ATTTCAGATG ACGCGCAATA TAAAAGTTGA TGGCACGCTG
ATGAAGCGTT TGCAGCAAGA ACTAGGAAGT ACAGATACTG TCGAACTGGT AACAGTGATT
GCTGCTTACA ACATGGTGTC TCGATTCCTA ATTGCGCTGG ATGTCAATCC AGAAGACCAC
CCTCCAGCTT AA
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| Protein sequence | MSERLIPYQP MDLAEPAELV AAIRKRRGGQ FINLDRMLLH SVPIAEGWNH FIGEIRNNLS
LDPKLRELAM CGVAVLNGAE YEFFHHAPPF KKAGGTEEQV QGLRLIGQAT FPRQLFSQVE
NDAADLTFQM TRNIKVDGTL MKRLQQELGS TDTVELVTVI AAYNMVSRFL IALDVNPEDH
PPA
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