| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0404 |
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| Symbol | |
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| ID | 5052113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 395366 |
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| End bp | 397171 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470555 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001155188 |
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| Protein GI | 145588591 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.139193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA TCCGCAATTT TTCTATCATC GCCCATATTG ATCATGGCAA GTCTACGCTT
GCAGATCGCA TTATTCAGCA TTGTGGCGGC CTCTCTGATC GTGAAATGGA AGCCCAAGTT
CTCGATTCGA TGGATATTGA GCGCGAGCGT GGAATTACGA TTAAAGCCCA AACAGCTGCA
TTGACTTATA AGTCCAGGGA CGGCAAAACC TACAACATCA ATTTGATTGA TACGCCGGGC
CACGTTGACT TTTCATACGA GGTGAGCCGT TCTTTATCTG CATGCGAAGG TGCATTGCTG
GTGGTGGATG CTAGTCAAGG TGTTGAGGCT CAAACCGTAG CCAACTGTTA CATGGCCTTA
GAGTTAGGTG TCGAAGTAGT ACCAGTGCTT AATAAGATTG ACTTGCCTCA AGCTGATCCT
GAGCGCGCTA AAAAAGAAAT TGAAGATGTG ATTGGCATTG ATGCATCTCA TGCAGTCACC
TGCTCAGCCA AAACAGGCTT AGGTGTTCAA GATGTGATCG AGGAGATGAT TGCTAGAGTG
CCTCCGCCCA CAGGTAACGC AGCAGATCCA TTGCAAGCTT TGATTATTGA TTCATGGTTT
GATAACTACG TTGGCGTGGT CATGTTGGTG CGCGTTGTAA ATGGCTCTTT AAAACCAAAA
GACAAAATTA CCTTAATGGC GAATGGTTCA AGTCATTTAG TTGAACACGT AGGCGTGTTT
AGTCCAAAGT CGATAGACCG CCCTGAGTTA TCTGCTGGTC AAGTGGGCTT TGTGATTGCT
GGTATTAAAG AGTTAAAAGC CGCTAAGGTG GGTGATACCG TAACGCATTC TCCAGGACAG
CAAGGTCGAG TTCCCGCTAC TGAGCCGCTA CCCGGCTTTA AAGAAGTGAA GCCTCAAGTG
TTTGCTGGTT TATATCCCGT GGAATCAAGT GAATACGATC AGTTGCGTGA ATCATTAGAG
AAGTTGCAGT TAAACGATGC TTCCCTTTTG TATGAGCCAG AAGTGTCACA GGCTCTTGGT
TTTGGATTTC GTTGTGGCTT CTTAGGTTTA TTGCACATGG AGATTGTGCA AGAGCGCTTA
GAGCGTCAGT ACGGCATGAA TCTCATTACT ACCGCTCCAA CGGTGGTGTA CCAAGTAGAG
CAATCTGATG GATCTATTCT CTCAGTTGAT AACCCATCGA AGATGCCAGA GGCCAGCAAG
ATCAATACGA TTCTTGAGCC TATCGTGACA GTGAATTTGT ATATGCCCCA AGAATATGTG
GGTGCGATCA TTACTCTGTG TGTTGGTAAG CGTGGCATAC AAATGGACAT GAATTATCTA
GGCCGTCAAG TCAAACTCAC TTATGAGTTG CCGATGGCAG AGATTGTGTT GGACTTCTTT
GACAAAATGA AATCCATCTC ACGCGGTTAT GCCTCGATGG ATTATGAGTT CAAAGAGTAT
CGCCCAGCAG ACGTAGTGAA GGTTGATATT CTCATTAATG GCGAGCGGGT GGATGCACTC
TCTGTGATTG TTCACCGCAG TAATAGCCAG CATCGTGGAC GCGAAGTTGT TGCTAAGATG
CGCGGCATTA TTCCTCGTCA AATGTTTGAT GTAGCTATTC AAGCGGCCAT TGGTAGCAAT
ATCGTTGCCC GTGAAAACGT AAAGGCCTTA CGCAAAAACG TTTTGGCTAA GTGCTATGGT
GGTGATATCT CCCGTAAACG CAAGTTATTA GAGAAGCAAA AAGAGGGTAA GAAGCGTATG
AAGCAGGTTG GTAACGTAGA AATTCCACAA GAAGCTTTCT TAGCTATTTT GCAGGTGGAC
GATTAA
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| Protein sequence | MDLIRNFSII AHIDHGKSTL ADRIIQHCGG LSDREMEAQV LDSMDIERER GITIKAQTAA
LTYKSRDGKT YNINLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYMAL
ELGVEVVPVL NKIDLPQADP ERAKKEIEDV IGIDASHAVT CSAKTGLGVQ DVIEEMIARV
PPPTGNAADP LQALIIDSWF DNYVGVVMLV RVVNGSLKPK DKITLMANGS SHLVEHVGVF
SPKSIDRPEL SAGQVGFVIA GIKELKAAKV GDTVTHSPGQ QGRVPATEPL PGFKEVKPQV
FAGLYPVESS EYDQLRESLE KLQLNDASLL YEPEVSQALG FGFRCGFLGL LHMEIVQERL
ERQYGMNLIT TAPTVVYQVE QSDGSILSVD NPSKMPEASK INTILEPIVT VNLYMPQEYV
GAIITLCVGK RGIQMDMNYL GRQVKLTYEL PMAEIVLDFF DKMKSISRGY ASMDYEFKEY
RPADVVKVDI LINGERVDAL SVIVHRSNSQ HRGREVVAKM RGIIPRQMFD VAIQAAIGSN
IVARENVKAL RKNVLAKCYG GDISRKRKLL EKQKEGKKRM KQVGNVEIPQ EAFLAILQVD
D
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