| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0337 |
|---|
| Symbol | |
|---|
| ID | 5052296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 332901 |
|---|
| End bp | 334973 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640470488 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_001155121 |
|---|
| Protein GI | 145588524 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCATTTA ATCCTCTCTT TGTAGACCAA GCCCCCCTTC ATCTCAAATA TCGCAAAGAT
ATTGATGGCC TCCGTGCGTT AGCTGTTTTG CTAGTGGTGA TTTATCACGC TTTTCCAAAT
TGGGCCCATG GCGGCTTTAT TGGGGTGGAT ATCTTCTTTG TAATTTCTGG TTACTTAATT
ACCTCAATCA TTTTGGATGG GCTAGCAGAT AAGACATTTA GTCTGGTGGA TTTTTATTGC
AAACGCATTA TCCGAATCTT CCCAGCATTA ATTTTGGTAT TGGCTTGCTC CATTGGATTG
GGCTGGTTCA TGCTCTATCC AGCGGAACTA CAGCTACTCG GAAAGCATCT CCTCTCTGCA
GTGGGGTTTT TTTCAAACTT CACCTATCTT TCTGAGGCGG GCTATTTTGA TAGTCGAGCC
GTTGAAAAGC CTTTATTGCA TCTTTGGTCT TTGGCAATTG AAGAGCAGTT TTATCTAATC
TGGCCAATAC TTTTATGTTT TCTCTATAAA TTACGCTCGC GCTCTCCTTC ATCTTTAGGT
TTTTCTTTGC GTGGGTATTT ATTGCTATTG ATAGCCTGCT CTTTCGCCTG GAATATGCAT
CTCATTCATG TGAATAAGTC AGCCGCTTTT TTTCTTCCTT TTAGTCGGTT TTGGGAATTG
CTGGTTGGCG CCTTATTGGC TCACGTATTT AGCTCAGATC AGTCTGGGTC TCGTGGGGGT
GACGGCATTT CCTCATGGGG CTTGCGGCTG CAGACTATTG CAGAAAATAC GTTATTTAGA
CAGCTTGTTT CATTCTTGGG TTTAACTTGC TTAGTGGTAG GCGTGATGGT GATTTACCCG
CGCAGCTTAT TCCCAGGCTG GCTTGCTCTT CTGCCCGTTG TTGGTGCTGC CTTGATCCTC
TATGGTGGTG AAAAGACTTG GATTAATCGC TACCTTTTAT CAAATCGCTT CATGGTCGCC
ATTGGACTGA TTAGTTATCC CCTCTATTTA TGGCATTGGG CGCTGCTCTC CTTTGCGCAA
ATTTGGGGAC CAATATTTAT TGAGCAGCGC TTACTCATTG TTGGCCTCTC TCTTATGTTT
TCTTGGCTTA CGTATCGCCT CATTGAAAAG CCATTGCGTA ATAGGCAGTT CATTAGAAAA
AAATCCAGCG TATTGATTGG ATTGATGATT GCCATCTTGG CCGTTGGATT TATTCTGACA
TCCAATGGTT TTTCTGAAAG AGGCGTGAAC ACACTTTCTC AGTTTGAGCA GTCTGCTCAA
GATGGTTCTG ATGGGGGATT TGTTATTCAG GGTTGTGGTT TATCTGACCT GGCTTTTAAA
GAATACTTTG CTGGCTGCTT TGAGGATCGG CGCGAGCCTG CTAAATTTGC CTTAGTTGGG
GATAGCAAAG CTATGGCATT GTTTCCGGGC TTAGTGCGCA GCTCTCAAGC TGGGGGTAGG
TGGCTAACGA TCTATGGCCC TGGTGGGGAT AAAGCTATCA TGCCTTACTT ATCTGATAGC
CGCGCAGATG TAAAGCCCTC TCAATCAACT TATACCGATC AAGCGATCAA ACAAGTTTCC
AAAAACTCAC AAGTGAAAGT GGTCGCTTTA GCATTTTCAA GCAAAGGCGT CATGACAACC
GATGTAGATA GTCTTTATAA GGGTGAGCAT CAAGCCCAGG CAATTCAGGG GCTAGATGCG
ATTGTTGCCA AATTAGTGGA AAGTAGAAAG CAGGTGGTTT TGATAGTCGA CAATCCCACC
CTGGCATTGC CACAAGATTG TTTTCATAGA AAGCTCGGCA TTAGTTGGTT GGATCAATTT
GAGAAAATTG ATCCCCGCTG CTCAATGACT TATGAAAAGC ATACCCAAAT GACGGCCAAA
TACCTTGAAG TTCTGAATGC TGTTGCAAAA AAATACCCAG GTCAAGTTCG CGTATTTGAT
TCTGGGCCCA TTTTATGTGA TGTTCAAAAT AATATTTGCT CCTATCAAAA AGACGGCCGG
AAAATGTATT CTTATACTGA CCATATCTCT GACTATGCAG CGGGAAGAGT CGGTGAGGTT
TTAAATCATC AACTTGTAGA TTCATCACGC TAG
|
|---|
| Protein sequence | MSFNPLFVDQ APLHLKYRKD IDGLRALAVL LVVIYHAFPN WAHGGFIGVD IFFVISGYLI
TSIILDGLAD KTFSLVDFYC KRIIRIFPAL ILVLACSIGL GWFMLYPAEL QLLGKHLLSA
VGFFSNFTYL SEAGYFDSRA VEKPLLHLWS LAIEEQFYLI WPILLCFLYK LRSRSPSSLG
FSLRGYLLLL IACSFAWNMH LIHVNKSAAF FLPFSRFWEL LVGALLAHVF SSDQSGSRGG
DGISSWGLRL QTIAENTLFR QLVSFLGLTC LVVGVMVIYP RSLFPGWLAL LPVVGAALIL
YGGEKTWINR YLLSNRFMVA IGLISYPLYL WHWALLSFAQ IWGPIFIEQR LLIVGLSLMF
SWLTYRLIEK PLRNRQFIRK KSSVLIGLMI AILAVGFILT SNGFSERGVN TLSQFEQSAQ
DGSDGGFVIQ GCGLSDLAFK EYFAGCFEDR REPAKFALVG DSKAMALFPG LVRSSQAGGR
WLTIYGPGGD KAIMPYLSDS RADVKPSQST YTDQAIKQVS KNSQVKVVAL AFSSKGVMTT
DVDSLYKGEH QAQAIQGLDA IVAKLVESRK QVVLIVDNPT LALPQDCFHR KLGISWLDQF
EKIDPRCSMT YEKHTQMTAK YLEVLNAVAK KYPGQVRVFD SGPILCDVQN NICSYQKDGR
KMYSYTDHIS DYAAGRVGEV LNHQLVDSSR
|
|---|
| |