| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0241 |
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| Symbol | |
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| ID | 5053918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 240900 |
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| End bp | 242378 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470393 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001155026 |
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| Protein GI | 145588429 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.76233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAG GACTTGTTTG GCTTCGTCGA GATCTTCGCC TGTATGACAA TGCAGCGCTC
CATTACGCCC TCAAGGAGAG TAAACAGGTT TGGGTAACCT TTATTTTTGA TGAAGAGATT
CTCAAGCCCC TACTCAAGGG AGAGCTAGAT GCTCAGAGAT TAAAACATGA CCGCCGAGTC
GACTTTATCT GGCAAGGTCT AGAGCAAATC GATGAGGAAC TCCGCAAACA AGGAGGTGGT
CTGATTGTGC GCTTTGGTAA GCCCGTCGAA TGCATTCCCC AAATTGCCAA AGACCTTGGT
GTTGATACCG TATTCACCAA TCATGATTAC GAGCCATCTG CTATTGCCCG TGATGAAGCA
GTAAAGACAT TGCTAGCAAA ATCTGATATT CAATTTGAGA GTTTCAAAGA TCAAGTCATT
TTCGAGAAAA AAGAAATTTT GACCAACTCG AATACGGTTT TCTCCATCTT TACGCCTTAT
AAAAACAACT GGCTTAAAAC CCTTCAAGAA AAAGATTTAG TGGCTTATGA ATGCTCTGCA
AAGCCGGGAC AATTCGCTGC CATACCAAAA AAACTGGCTC AAGAAATTCC CACCTTAGAA
TCTATGGGCT TTTGCAAGAC TGGTATAGAA GCCTATTTAC CGCCGGGCGC AGAGGGTGGT
CAAGCTTTTT TAGAAGACTT TCTTCCGCGG ATTGATCAAT ACCAGGTTGG GAGAGACTTT
CCTGCTATCA AGGGAGTTAG TTATCTCTCA ACTCACCTAC GCTTTGGCAT GCTATCTATT
AGAGGCTTGG TTCGCGAAGC ACATCGCAGA ATGTTAGCGG GCAGCATGGG TGCAACGATT
TGGTTAAGCG AATTGATTTG GCGTGATTTC TATTTCATGA TTTTGGCAAA TCATCCACGT
CTTGCAAAAG GCGCGTCTTT TAAACCCGAC TACGACAATA TTGTTTGGGA ACAAGGCAGT
GTTGCAAAGA AATTATTCGC CGCCTGGTGT GAAGGTAAGA CTGGCTACCC GCTAGTCGAT
GCAGCTATGC ATCAACTGAA TCAAAGTGGC TATATGCACA ATCGTCTGCG TATGGTGGTA
GCTAGCTTCC TCACTAAGGA CCTAGGAGTC GATTGGCGCT GGGGTGAGGC GTATTTTGCA
GAACACCTCA ATGACTTCGA GCTCTCATCC AATAATGGGG GATGGCAATG GGCATCTTCT
TCCGGCTGTG ATGCACAGCC CTATTTCCGC ATCTTTAACC CCATTACTCA GTCAGAGAAG
TTCGATCCTG AAGGTAAATT TATTCGTCGT TATTTACCTC AGCTCAATCA TTTATCGAAA
AAATCCATTC ATGCGCCCTG GAAAGCTGGC CACATTGAGT TAGAGGCGGC AGGTATTACT
TTGGGACGCG ATTATCCACT TCCAGTTGTG GACCATGACG AAGCCCGTAA AAAAACCTTA
GTGCGTTATA GCGTCGTTAA AAAAGTTACC GAGGCATAG
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| Protein sequence | MQKGLVWLRR DLRLYDNAAL HYALKESKQV WVTFIFDEEI LKPLLKGELD AQRLKHDRRV
DFIWQGLEQI DEELRKQGGG LIVRFGKPVE CIPQIAKDLG VDTVFTNHDY EPSAIARDEA
VKTLLAKSDI QFESFKDQVI FEKKEILTNS NTVFSIFTPY KNNWLKTLQE KDLVAYECSA
KPGQFAAIPK KLAQEIPTLE SMGFCKTGIE AYLPPGAEGG QAFLEDFLPR IDQYQVGRDF
PAIKGVSYLS THLRFGMLSI RGLVREAHRR MLAGSMGATI WLSELIWRDF YFMILANHPR
LAKGASFKPD YDNIVWEQGS VAKKLFAAWC EGKTGYPLVD AAMHQLNQSG YMHNRLRMVV
ASFLTKDLGV DWRWGEAYFA EHLNDFELSS NNGGWQWASS SGCDAQPYFR IFNPITQSEK
FDPEGKFIRR YLPQLNHLSK KSIHAPWKAG HIELEAAGIT LGRDYPLPVV DHDEARKKTL
VRYSVVKKVT EA
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