| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0186 |
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| Symbol | |
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| ID | 5054004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 182586 |
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| End bp | 183668 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470338 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001154971 |
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| Protein GI | 145588374 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.301874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAGTG CTCATGACGA CTCACTAATC ATTCGGACCT GGTATGAGAT AGCCGTTAAT
GCACTCCATG CCAGAGCTAG TGATATTCAT ATTGAAGCGG GCCCCCAAGA TACCTTAGTG
CGCTTTCGGG TTGATGGGCT ACTCAACAAA CAAGCTCGTT ACTCTGTAGA CCTGCATGAA
CGATTAATCA CACGTATCAA AATACTGGCT CGCCTTGATA TTGCAGAAAA GCGGTTGCCC
CAAGATGGGC GACTGTGCAT AGGCCATGAC TTTACTAAAC CTGATGTTGA TTGCCGGGTG
TCCATCATTC CTACACTGCA TGGAGAAAAG GCAGTCATCA GGATATTACT CAATCATCTC
GAAGAGCTAG CCTTGGAGCA AATTGGTCTC TTGCCAGAGC AGCTAGCAAT CTTTCAAAAG
GCGCTCAGTC AGCCTAATGG ACTCATCTTA GTCACAGGCC CAACTGGTAG CGGAAAGACC
AGAACCCTGT ATAGCTGCCT ACAAGAACTC AATCAAATTC ATCGCAATCT TTGCTCTATT
GAGGATCCGA TTGAAATTCG TCTTCCTGGC ATCAACCAAG TTGCCTATCA CCCCCGTGCC
GGCCTCGATT TTCCAGTCAT TATTAAAGCC CTACTAAGGC AGGATCCCGA TGTCATCATG
ATTGGAGAAA TCCGGGATGG CGCCACCGCA CAACTTGCTA TACAAGCAGC GCAAACAGGC
CATCTCGTTC TCAGCACCCT ACATACTCGT GATGCCAGAG GAGCGCTGGC TAGACTAAAA
AACCTGGGCA TAGATCAAGA AGCTCTTGAG TCAACCTTGC TGAGTGTGAG CTCTCAACGA
TTGCTGCGCA AGATCTGTAC TGAGTGCTCC CAAAAAATAC CTACTCCACC CCTAGTCAAC
TGCTCGATGT GCATGGGTAA GGGGTATTGG GGTCGAATTG GTGTTCATGA AGTTCTGAGC
GCTAAACATC TATTCATCCC CTCATTGCCT TATTTGAGTA TGTATGAGGC AGGACTCCAC
TATGTCAAAA CTGGTGAAGT CAACCAGGCA TCATTGAATA ATGAGGTCAG TGCATGGCGC
TAA
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| Protein sequence | MSSAHDDSLI IRTWYEIAVN ALHARASDIH IEAGPQDTLV RFRVDGLLNK QARYSVDLHE
RLITRIKILA RLDIAEKRLP QDGRLCIGHD FTKPDVDCRV SIIPTLHGEK AVIRILLNHL
EELALEQIGL LPEQLAIFQK ALSQPNGLIL VTGPTGSGKT RTLYSCLQEL NQIHRNLCSI
EDPIEIRLPG INQVAYHPRA GLDFPVIIKA LLRQDPDVIM IGEIRDGATA QLAIQAAQTG
HLVLSTLHTR DARGALARLK NLGIDQEALE STLLSVSSQR LLRKICTECS QKIPTPPLVN
CSMCMGKGYW GRIGVHEVLS AKHLFIPSLP YLSMYEAGLH YVKTGEVNQA SLNNEVSAWR
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