Gene Pnuc_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0143 
Symbol 
ID5052907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp137967 
End bp138317 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content43% 
IMG OID640470295 
Producthypothetical protein 
Protein accessionYP_001154928 
Protein GI145588331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.263745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTT TAAAGCCGTC CGCTTATTTA CGTTTTTTAA ACTTGATTGA TGCCCTTGAT 
CGCATCAATC CTGGGAAAAA GCTCGACTCC ATTGAAGAAA GTCTCTTGGA TAAGGTTGTG 
TCTGCAGCTC AAGCAAAACA GTCTATTCTG GTGGGTGATT TAATTTCCCT CTCTGAATTA 
GGCTCTCAGG CAACCCTGCA CGGCCGATTA AAGAACCTGA GTGCCATGGG ATACATCAAG 
ATGGCCGGCA ATAGTGATGG CCGTAAAAAG GAAATTCTTC CCACTAAGCA AGCCCTTAAG 
CGTTATGAAG AAATTTCAAG ATGCTTAGAG AAAGCAGTCA ATAGGACCTG A
 
Protein sequence
MQTLKPSAYL RFLNLIDALD RINPGKKLDS IEESLLDKVV SAAQAKQSIL VGDLISLSEL 
GSQATLHGRL KNLSAMGYIK MAGNSDGRKK EILPTKQALK RYEEISRCLE KAVNRT