Gene Pnuc_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0124 
Symbol 
ID5052733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp119344 
End bp119766 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content46% 
IMG OID640470275 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_001154909 
Protein GI145588312 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.533935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTTT TAAAGGAATT TCGGGACTTT GCCGTCAAGG GCAATGTGAT TGACTTAGCC 
GTCGGTGTCA TTATTGGCGG CGCTTTCGGG AAAATCGTAG ATTCCCTGGT CAATGACATC 
GTGATGCCCC TGATTTCGAC CCTTTTTGGG GGTCATATCG ACTTTTCTAA CCTATTTATT 
GTTTTGGGGC AGGTGCCAGA AGGAGTGCCC AGAACATTTG ATGCCTTAAA AAAGGCGGGG 
GTACCGCTTT TTGCCTATGG CAATTTCATC ACGATTTCAA TCAATTTCAT CCTCTTGGCT 
TTTGTGATCT TCCAAATGGT CAAGGTTGTA AACAAGGTAC GCGTAATGGA TGCACCTCCG 
CCGCCACCCA CACCAGAAGA TATTGTTTTG CTGCGCGAAA TTCGCGATAG CTTGAAAAAA 
TAA
 
Protein sequence
MGVLKEFRDF AVKGNVIDLA VGVIIGGAFG KIVDSLVNDI VMPLISTLFG GHIDFSNLFI 
VLGQVPEGVP RTFDALKKAG VPLFAYGNFI TISINFILLA FVIFQMVKVV NKVRVMDAPP 
PPPTPEDIVL LREIRDSLKK