| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0111 |
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| Symbol | |
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| ID | 5053361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 106577 |
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| End bp | 107338 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470263 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001154897 |
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| Protein GI | 145588300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.406694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGA TTCCCGCAAT TGATCTTAAA GATGGCCACT GTGTTCGACT CGAACAAGGT
GATATGGATA AGGCCACAGT TTTTTCCGAA GACCCTGGTG CTATGGCGGC ACATTGGATT
AGCAAGGGTG CTCGTCGACT ACATTTAGTT GACCTGAATG GTGCCTTTGC TGGCAAATTA
AAAAATGAGT CGGCCATTAA ATCGATTCTC AAGGCAGTTG GAAATGAAAT CCCTGTTCAG
TTAGGCGGCG GCATTCGTGA TCTTGAGACG ATTGAGCGTC TACTCGATGA CGGAATTAGC
ACCGTCATTA TTGGCACTGC AGCTGTAAAG AACCCAGGCT TTGTTCAGGA TGCCTGCACA
GCATTTCCAG GTCATGTGAT GGTTGGCCTA GATGCCCGTG ATGGCAAAGT TGCAACTGAT
GGTTGGAGCA AAATTACTGG CCATGAGGTC ATTGACCTGG CCAAGAAATT TGAAGATTGG
GGCGTGGAAG CCATTATCTA TACCGATATT GGTCGCGATG GTATGTTGAA AGGTGTCAAT
ATTGAAGCCA CGATGAAGCT TGCTCAAGCT ATTCGTATTC CTGTTATTGC CAGTGGTGGC
CTTTCCAATA ATCAAGACAT TGAAGCGCTC TGCAAAGCGG AAGAAGAGGG CGTGATGGGT
GTGATTGCCG GACGCTCTAT TTATGCCGCT GATCTAGATT TAGCCGCTGC CCAAAAATAT
GCGGATGAAT TGACGCTGAA ATATGCGAAG AAAATTATCT AG
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| Protein sequence | MLLIPAIDLK DGHCVRLEQG DMDKATVFSE DPGAMAAHWI SKGARRLHLV DLNGAFAGKL
KNESAIKSIL KAVGNEIPVQ LGGGIRDLET IERLLDDGIS TVIIGTAAVK NPGFVQDACT
AFPGHVMVGL DARDGKVATD GWSKITGHEV IDLAKKFEDW GVEAIIYTDI GRDGMLKGVN
IEATMKLAQA IRIPVIASGG LSNNQDIEAL CKAEEEGVMG VIAGRSIYAA DLDLAAAQKY
ADELTLKYAK KII
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