Gene Pnuc_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0071 
SymbolrpmD 
ID5052751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp69476 
End bp69664 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content44% 
IMG OID640470223 
Product50S ribosomal protein L30 
Protein accessionYP_001154857 
Protein GI145588260 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.230621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAT CTAACACCAA AGTCAAACTG CAATTAGTAC GCAGCTTGAT CGGCACACGC 
GAAAGCCACC GTGCAACTGT ACGTGGCTTA GGCCTTGGTC GTATCAATTC AGTTTCTGAA
TTGGAAGACA CGCCAGCTGT TCGCGGCATG ATTAATAAAG TTTCTTATCT AGTTAAAGTC
ATTGGCTAA
 
Protein sequence
MTTSNTKVKL QLVRSLIGTR ESHRATVRGL GLGRINSVSE LEDTPAVRGM INKVSYLVKV 
IG