Gene Pnec_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1761 
Symbol 
ID6183803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1537328 
End bp1537798 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content42% 
IMG OID641672259 
Producthypothetical protein 
Protein accessionYP_001798429 
Protein GI171464316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.758553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACTT TGGTACGGCT TGACGAACGC TTAATTGAAA TTACTTTAGG AATATTTTTA 
ATATTGTTGA TTCCGATTCG TCGCTGGATG CGGAGAAAGA ATTTTTATTT ACAGCTTTGG 
CAAATGAGTT TGGTTGGCGC TGCCATTGGT TATCTAACAG GTGTCGTTGC TACTACGGGC 
GCAATAAATA CACCCTTCTT TTTGGCATAT GGCTTGAGTA AGGGCGCCTA CTTAGGAACC 
GAAGTGGCGA GCACCTTATC AATTTTGTTT ACCAAGGGCA TTGCATTTCA CCAGCTTGGA 
TTTTTAAATA CGACAGCTGT CATTCAAGGC CTTCTTATTG GGGGCTGTGT ATTAGTTGGC 
GCCATTTTTT CTAAAAAGAT TGTGCTGGCA TTGCCGGAAA AGAAATTTTT GCTCCTCATG 
GAGTTGGTAA TGCTCCTTTC GGGCCTCTCT ATTCTGATGA TGTCTTATTA G
 
Protein sequence
MNTLVRLDER LIEITLGIFL ILLIPIRRWM RRKNFYLQLW QMSLVGAAIG YLTGVVATTG 
AINTPFFLAY GLSKGAYLGT EVASTLSILF TKGIAFHQLG FLNTTAVIQG LLIGGCVLVG 
AIFSKKIVLA LPEKKFLLLM ELVMLLSGLS ILMMSY