| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1723 |
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| Symbol | |
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| ID | 6183641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1507587 |
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| End bp | 1508441 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672226 |
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| Product | Diaminopimelate epimerase |
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| Protein accession | YP_001798396 |
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| Protein GI | 171464283 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.714915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGGTG ATGGAAACGA CTTCATTGTG CTCAATGGCA TCGACCAAGA TCTCAGTGGC
ATTACACGAG AACAATGGCA AGTATTAGCG CATCGACAAT TTGGTATTGG TGCCGATCAA
ATTCTATTGG TTGAAAATGC AACGCGTCCA GATGCGGATT TTCGGTATCG CATTTTTAAT
GCGGATGGTG GCGAAGTAGA GCAGTGCGGC AATGGTTCAC GCTGCTTTGT TCGCTTTGTC
CAAGATCATG GCCTATCCAG CAAGAACCCT TTGCGTGTAG AAGTTGCGCA TACCGTTCTA
ACACTTAAGT CACATCCTGA TGGACAGGTT GAAGTGGACA TGGGCGCACC TATTTTTGAA
CATCGGCAGA TTCCTTTTAA TGCCGATGGC TTGGCAAGCG TTCAAGAGTT TCAAGAAACG
TTATATGTGC TTTCCTTGAA CCATCCTGCT ACGCACGATG GTCTAGTTAG CGTTTTGTCC
ATGGGCAATC CACATGCCGT GCAAGTAGTT GGCGATGTTG ATAGCGCACC CGTTCTAGAA
GAGGGCCCTG AGATTGAACA ATTTGCAGCA TTCCCTAAAA AGGTAAATGC AGGCTACCTA
CAAGTGATCA ATCGCAATGA AATTAAATTA CGTGTTTTTG AGCGTGGCGC AGGGGAAACC
TTAGCCTGCG GCACTGGCGC ATGTGCGGCA GTCGTTTCTG GTATTCGCCG AGGGCTTCTG
GACTCGCCAG TTAAAGTAAA CACGCGCGGC GGAGATCTTG TGATTGCTTG GGCTGGAGCC
TCTGAAGGTG TGGCGCAGCC AGTAATTATG ACTGGCCCAG CGGTTACCGT TTTTGAAGGT
GAAACAGAAA TCTAA
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| Protein sequence | MHGDGNDFIV LNGIDQDLSG ITREQWQVLA HRQFGIGADQ ILLVENATRP DADFRYRIFN
ADGGEVEQCG NGSRCFVRFV QDHGLSSKNP LRVEVAHTVL TLKSHPDGQV EVDMGAPIFE
HRQIPFNADG LASVQEFQET LYVLSLNHPA THDGLVSVLS MGNPHAVQVV GDVDSAPVLE
EGPEIEQFAA FPKKVNAGYL QVINRNEIKL RVFERGAGET LACGTGACAA VVSGIRRGLL
DSPVKVNTRG GDLVIAWAGA SEGVAQPVIM TGPAVTVFEG ETEI
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