Gene Pnec_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1707 
Symbol 
ID6183558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1492204 
End bp1493694 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content46% 
IMG OID641672210 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_001798380 
Protein GI171464267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG CTTTGCCCAA GGTTCTGCAA ACACTAGCAG GCAAACCCCT GCTCCAGCAC 
GTTCTTAATA CCGCACTTTC GCTGCAGGAT AAAAAAGCGA AATCTGGCCC CGTTGTTGTG
GTTGGACATG GCGCAGCAGA CGTTAAAACA TTTTTGGCTA ATACTTCTAA AGAGAATCCA
AGTTTTGGCA AAGTAGTCAC CGCGCTGCAG GCCGAACAAA AGGGTACAGG CCACGCCTTA
TTACAAGCGT TACCAAAATT AGATGTTCAA GAGCCAACCT TGGTTTTGTA TGGCGATGTT
CTACTGACTA CTAAAAAGAC GCTCGCTAAA TTAGCAAAGT TAGCTGATGG TGCTAGAGGG
CAGGATTGCG CATTGGCTTT GCTGACACAA AATCTCAGCA ACCCAACCGG CTACGGTCGC
ATCGTGCGCG ATTCGGATGG TTCAGTAAAA GAGATTGTTG AAGAGAGGGA CGCAACTCCA
GCGCAAAAGC AAATTCAAGA AATCAACACC GGCATCATGG TGTTACCAAC AAACTCATTG
AAGAAGTGGT TAAAAGCTTT GCGCGCAAGT AATGCTCAGG GTGAGTATTA CTTAACCGAT
GTGATCGCCA TGGCAGTCAA AGATGGCGTG CCAATTCGTA CGACTCAAGC TGATGATGAG
TTTGAAACAG TTGGAGTCAA TAGTCGTGAT CAACTGGCTG CGCTTGAACG AGTGCACCAG
CTCAATATTG CTAATCAATT AATGGATGCC GGAGTATCAC TTGCTGATCC TGCTCGCATA
GATGTGCGAG GCACTTTAGA GTGTGGAACA GACGTATCAA TTGACGTTGG CTGCGTGTTT
GAGGGCTGCG TCACTTTGGA TGCGGGTACG AAGATTGGTC CTTACTGTGT GATTCGCAAT
AGCGTTATTG GTAAAGGTGT GGCCATTCAC GCGTACAGCC ATGTAGATGG CGCAAAAGTA
GGCAATCAGT CTCTGATTGG CCCATATGCA CGCTTGCGTC CAGGAGCAGA TTTATCAAAC
GATGTTCATA TCGGTAACTT TGTTGAGGTG AAGAACAGCA AAATCGCCGC CAATAGCAAA
GCTAACCATT TGGCTTATGT TGGTGATTCG ATGGTTGGAT CCAGGGTCAA TATTGGTGCG
GGTACGATTA CTTGTAACTA CGATGGCGTT AATAAACATC AAACCATTAT TGAGGATGAT
GTTTTCATTG GCTCTGACAC ACAGCTCGTT GCACCAGTGC GTGTAGGTCG CGGTGCGACA
TTAGGCGCCG GTACAACATT GACTAAAGAT GCGCCAGCAA ATCAGCTGAC GGTATCTAGA
GCAAAGCAAA TTTCATTGCA GTGGAAGCGA CCTGTAAAGC AAGAAAAGAA GAGTGTCGCC
AAAAAGCTAG CCGCAAAAAA GATGGCAGCT AAAAAAGCTA CTACAAACAA ATTAATCGCA
AATAAAGCAA TTAAGAAAGC AGTCAAGAAA ACTGAAAAAG GTAAAAAATA A
 
Protein sequence
MKSALPKVLQ TLAGKPLLQH VLNTALSLQD KKAKSGPVVV VGHGAADVKT FLANTSKENP 
SFGKVVTALQ AEQKGTGHAL LQALPKLDVQ EPTLVLYGDV LLTTKKTLAK LAKLADGARG
QDCALALLTQ NLSNPTGYGR IVRDSDGSVK EIVEERDATP AQKQIQEINT GIMVLPTNSL
KKWLKALRAS NAQGEYYLTD VIAMAVKDGV PIRTTQADDE FETVGVNSRD QLAALERVHQ
LNIANQLMDA GVSLADPARI DVRGTLECGT DVSIDVGCVF EGCVTLDAGT KIGPYCVIRN
SVIGKGVAIH AYSHVDGAKV GNQSLIGPYA RLRPGADLSN DVHIGNFVEV KNSKIAANSK
ANHLAYVGDS MVGSRVNIGA GTITCNYDGV NKHQTIIEDD VFIGSDTQLV APVRVGRGAT
LGAGTTLTKD APANQLTVSR AKQISLQWKR PVKQEKKSVA KKLAAKKMAA KKATTNKLIA
NKAIKKAVKK TEKGKK