| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1420 |
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| Symbol | |
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| ID | 6183618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1216682 |
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| End bp | 1217755 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671961 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001798133 |
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| Protein GI | 171464020 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTT TAGGAATAGA AACTTCTTGC GATGAGACTG GGGTGGCTTT ATACAACACC
ACTCCTTGGG GAGAGGGTAA ACCGGCCTTC CAGGGCATAC TGGGCCAAGG TTTGCACTCC
CAGATCGCCA TGCACCGGGA CTATGGGGGT GTTGTCCCGG AATTAGCCTC CCGTGATCAC
ATTCGCCGTG TTTTACCCCT TCTAGACCAA TCTTTGGCCC AGTCTAGCCT CAAATTGACC
GATATTGATG CCGTAGCCTT CACCCAAGGC CCAGGACTGG CTGGTGCCCT TCTCGTTGGC
AGCGCTTTCG CAAAATCCTT GGCTCAAGGG CTCAATTTGC CCTCAATTGG GGTTCACCAC
CTCGAAGGAC ACCTCCTATC GCCACTTTTG GGTCAAACAG CCCCTCAATT TCCCTTTATT
GCTCTTCTGG TATCCGGTGG ACATACCCAG CTCATGAAAG TCTCCGGCAT TGGGCATTAC
GAGCTACTGG GCGAAACCCT CGATGACGCA GCAGGGGAAG CTTTTGATAA GACCGCGAAA
TTACTCGGTC TCGACTACCC TGGTGGCGCA GCAATTTCCA AGTTAGCCGA ACAAGGTCGC
TCCGGCATTT TTGATTTACC AAAACCCATG CTGCATTCCG GTGATTTAGA TTTTTCTTTC
TCGGGATTAA AAACGGCCGT CCTCAATCAA GTTAAAAAGT TTGAAGAAAA AAAGATTGCC
ATCTCATCTG AGATAGCGCA GTTTCACGCC GATCTTGCTA GAAGTTTTGT TAATGCGATT
GTCGCGGTGC TAGTGAGCAA ATCTGAAAAA GCACTCAAAC AAACGGGCTG CAAACATTTA
GTGCTTGCTG GCGGTGTTGG TGCTAATTTA CAGCTGCGCA GCGCATTAAA TGAAAAAGCA
ACAAGAAATA ATTTTGAGGT GCACTACCCG CCTCTTGAAT TATGCACCGA TAACGGCGTG
ATGATTGCTT TTGCTGGAGC ACTGCGAATG CTAGCCAAAA ATAATGGCTC CACAACATCT
GGAGCCTTTG ATATCAAACC CCGCTGGGAT TTGCAAAGCA ATAACTTAGT TTAA
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| Protein sequence | MIVLGIETSC DETGVALYNT TPWGEGKPAF QGILGQGLHS QIAMHRDYGG VVPELASRDH
IRRVLPLLDQ SLAQSSLKLT DIDAVAFTQG PGLAGALLVG SAFAKSLAQG LNLPSIGVHH
LEGHLLSPLL GQTAPQFPFI ALLVSGGHTQ LMKVSGIGHY ELLGETLDDA AGEAFDKTAK
LLGLDYPGGA AISKLAEQGR SGIFDLPKPM LHSGDLDFSF SGLKTAVLNQ VKKFEEKKIA
ISSEIAQFHA DLARSFVNAI VAVLVSKSEK ALKQTGCKHL VLAGGVGANL QLRSALNEKA
TRNNFEVHYP PLELCTDNGV MIAFAGALRM LAKNNGSTTS GAFDIKPRWD LQSNNLV
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