Gene Pnec_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1392 
Symbol 
ID6183742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1194386 
End bp1194637 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content41% 
IMG OID641671937 
Producthypothetical protein 
Protein accessionYP_001798110 
Protein GI171463997 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTTGCG CCATTGTTAC AGACGCATTT TTACAATTTA GCCTAGAACA AGGAAATGAT 
CTCGTTACCC CAAGGCCCGA GTATCAATTT CCAGGATTAA TTGCAGGAGA CCAATGGTGC
TTATGCATTA ATCGCTGGGT GGAAGCATTA AATGCTGACT GCGCCCCATA CATCAAGTTA
GAGAGCACTC ATATCAAAGC ACTAGAAACA GTATCCTTAA ATATTCTCAA GAAATTCGCG
AGAGAAATTT GA
 
Protein sequence
MVCAIVTDAF LQFSLEQGND LVTPRPEYQF PGLIAGDQWC LCINRWVEAL NADCAPYIKL 
ESTHIKALET VSLNILKKFA REI