Gene Pnec_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1390 
Symbol 
ID6182922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1193764 
End bp1194174 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID641671935 
Producthypothetical protein 
Protein accessionYP_001798108 
Protein GI171463995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TGCTAAAAAT ATTCATCTCC ACCTATTTTA TTTTGTTGGG CTCGTTTGCT 
TTTGCTCAAA TCCCGGATAC GCAGCACTCA CAAGGCGTCG CTTATGTTAC TGGTGGGGTT 
GGTGAGGGCG AGTCTTCCGC TATTCTTGCT GAGGCAAAGC AATGGCCCTT GTTGCTGGAG 
ATGTCGCAAA TAGAGAATGG TAGGGGCATT TGGATTTTTG GCGCCATCAT CAAGGTCATC 
AACTCTAAAA AGCAAACTAT TTTCGAAGCG CAAGCAGACG GCCCTTATAT GCTCATCAAT 
CTTGAAGTAG GCGACTATCT TATCGATGCC AGCTATGGGG GGGTTGGTCA GAAAAGGGTT 
ATCTCTATCA AGACGGGCTC ACCACAAAAA ATTGCTTTGT TCTGGAAGTA A
 
Protein sequence
MKTLLKIFIS TYFILLGSFA FAQIPDTQHS QGVAYVTGGV GEGESSAILA EAKQWPLLLE 
MSQIENGRGI WIFGAIIKVI NSKKQTIFEA QADGPYMLIN LEVGDYLIDA SYGGVGQKRV 
ISIKTGSPQK IALFWK