| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1382 |
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| Symbol | |
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| ID | 6182953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1190147 |
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| End bp | 1190812 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671929 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001798102 |
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| Protein GI | 171463989 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.691654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGCTT TGCTAGCAAT CATTCACCGC GATTTGTTAT TGGTTATACG CCGTAAAAGC
GAAGTCCTCA CGGCTTTATT CTTTTTCGTA GTGATGACTA GCTTGTTTCC ATTGGGGATT
GGTGCAGATG CTGCGCTACT GCGTAAGATT GCACCAGGCG TACTTTGGGT AGCAGCCTTG
CTTTCTACCT TATTGGGCTT GCATCGGATG TTTGCAGCCG ACTATGTGGA TGGCGCCTTG
GAGCAGCTTG CTTTATCGCC CCAACCTCTG GTGTTGCTCG TGACTGGGAA AATTATTGCG
CACTGGATTG TGTGCGGTTT GCCATTAGTG CTTTTGGCCC CAATTATCGG TATTCAGTTT
GACTTAGATG TCAGCTCTTT GTATGTGCTG ATGGGCACTC TATTATTAGG CACCCCAGTG
CTATCCTTGT TAGGCTCAAT TGGTGCGGCA TTAACTCTGG GGGTAAGGGG TGGCGGCGTA
TTGTTAAGCT TATTAATACT GCCTTTATAT ATTCCAGTGC TTATATTTGG TGCGGGTGCC
GTATATGCCA ATAGTGTTGG ATTGGATACA TCAGGCCATT TTTCATTATT GGGCGCATTA
TTGATTTTGG CATTAGCATT TGTTCCTTGG GTATGTAGTG CCGCCGTAAA GATTGCGATT
GAATGA
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| Protein sequence | MKALLAIIHR DLLLVIRRKS EVLTALFFFV VMTSLFPLGI GADAALLRKI APGVLWVAAL
LSTLLGLHRM FAADYVDGAL EQLALSPQPL VLLVTGKIIA HWIVCGLPLV LLAPIIGIQF
DLDVSSLYVL MGTLLLGTPV LSLLGSIGAA LTLGVRGGGV LLSLLILPLY IPVLIFGAGA
VYANSVGLDT SGHFSLLGAL LILALAFVPW VCSAAVKIAI E
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