| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1377 |
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| Symbol | |
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| ID | 6183046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1186321 |
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| End bp | 1186848 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641671924 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_001798097 |
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| Protein GI | 171463984 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA AATTTTTAAT TCCTCTCATC TTGTTTGCGG GCTTGGTAAT GTTTTTGGCT
ATTGGTTTAA ATCGTGATCC TCACGAAGTG CCGTCACCAT TAATTAATAA AGCTGCGCCT
GCATTTGAGA TTCCTCAATT GTCTGAGCCC AACAAGACAC TTTCACCTGC AAGTATGAAG
GGTCAGGTAT GGATTCTGAA TGTTTGGGCA TCATGGTGCG TAGCTTGTCG TGAAGAGCAT
CCTGTCTTGG TTGAGTTAGC AAAATCTCAA GTAGCACCAG TCATTGGTTT GGATTACAAA
GATAAGCGTG AAGATGCTTT GGCAATGTTG TCTAAACAAG GAAATCCCTA TGCACTGTCA
GCTTTTGATG GCAATGGCCG AGTTGGCATT GATTATGGGG TGTATGGAGT TCCCGAAACC
TACATCATCG ATAAGGCAGG AATCATTCGC TTCAAGCATA TTGGTCCGCT AACTATGGAT
ATCTTGAATC AAAAAATATA TCCTGTATTA AGCGAGCTGA AAAAATGA
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| Protein sequence | MKAKFLIPLI LFAGLVMFLA IGLNRDPHEV PSPLINKAAP AFEIPQLSEP NKTLSPASMK
GQVWILNVWA SWCVACREEH PVLVELAKSQ VAPVIGLDYK DKREDALAML SKQGNPYALS
AFDGNGRVGI DYGVYGVPET YIIDKAGIIR FKHIGPLTMD ILNQKIYPVL SELKK
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