| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1354 |
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| Symbol | |
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| ID | 6183586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1167515 |
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| End bp | 1169140 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671906 |
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| Product | sulphate transporter |
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| Protein accession | YP_001798079 |
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| Protein GI | 171463966 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.0620345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTTC GTCCTCGACT ACTAGATTCC TTTAGCGGCT ACACCCGTTC CCTGTTTACC
AAGGATGTAT TGGCTGGCCT AACGGTTGGA ATAGTTGCCC TCCCTCTAGC TATGGCTTTT
GCGATTGCCA GCGGGCTTAA ACCAGAGGCG GGTATTTTTA CTGCAATTAT TGCCGGAGGG
CTCATCTCTC TATTAGGTGG TAGTCGCGTT CAAATCGGCG GCCCAGCAGG CGCTTTCATA
GTGATTGTTT ATGGCATTGT CGAACGTTAT GGCGTTCCCA ATTTATTGCT AGCTACAGCA
ATGTCAGGAG TATTTTTATT TTTGATGGGA GTCTTTCATC TTGGCACCTT GGTGCGCTTC
ATTCCTATCG CTGTCATTAT TGGCTTTACC AATGGGATTG CTTTTTTAAT TGGCCTCTCT
CAAATTAAAG AATTCTTTGG TCTGTATATT GAAAAAATGC CGGCCCAATT TTTTCAATCG
GTTCATGCGC TCTACTTAGC AGCCAACACC TTTAACCCCA TGGCACTTGC TGTTGCATGC
GGTAGCCTTG CCCTACTAAT CCTCTGGAAA TTATTTCAGA ATCGCCTTGG ATGGCTATCT
CATCTTCCAG CAACAGTGGT TGCAATGGTG GCAGCAACCA CTGTTACCAG CATTTTTCAT
TTACCAGTAG ATACCATTGG TAGTCGCTTT GGCGGCATTC CATCTGGCCT ACCCTCTTTT
GAGTGGATCC CAATTAGTTG GGATGGTGCT CAACATATGG TGGCGCCAGC TTTGACCCTA
GCCTTGCTAG GTGCGATTGA GTCTTTACTG TGTGCCCGTA TCGCCGATGG ACCTATTCAT
GATCGCCATG AATCAAATCA AGAATTAATG GCGCAAGGTA TTGCCAATTT CACCATTCCA
TTCTTTGGCG GCATACCTGC TACCGGAACG ATTGCGCGGA CTGTAACCAA CGTAGAAAGT
GGCGCATCTA CTCCAGTGGC CGGTCTTGTC CACGCTGCAA CTTTACTCAT CATCATTTTA
TTTGGGGCGC CTTTAGCTAA AAATATTCCG CTAGCTAGTC TCGCGGCCAT CTTGATGTAT
GTTGCTTGGA ATATGGGTGA CTGGAGAAAG TTTATTGATC TCAAGCAGTT CCGTCTGCCT
TACCGAATTA CCATTCTGAG CGTCTTTATC CTGATGGTTG TATTAGATCT CACCATTGCA
GTGGAGGTGG GTTTGCTGCT GGCCTTTATC ACTTTTATTT ACCGCATCTC GAGCCTATCG
CGTTGCGAAG CTGCTCTAGC AAATGATTTC CCGGGGCTTG CCAATCAACA GGGTCGCATT
GATGCTTACC GCATTCATGG TGCCATCTTT TTTGGAGCAG TAAAGCTCTT GGAAAAGATT
GAGACGGACC TACCGTCACA CACTCTATTG CTGGACTTAA AAAATGTGAT TTATATTGAT
ACTTCAGGCA TGGATACAAT TATGGAGCTC GCGCATCTTT GCAAGATCCG AAATATTCGC
CTAATCATTT GCGGCTTGGC GCATCAACCC CTAGAGATGG CCGAACGTAG CGAATTTATT
TCCACGCTGC CGCATGATGC ATTCTTCCCC GATCTCATTT CTGGAATAGA AGCGGCAACT
GCTTAA
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| Protein sequence | MFFRPRLLDS FSGYTRSLFT KDVLAGLTVG IVALPLAMAF AIASGLKPEA GIFTAIIAGG
LISLLGGSRV QIGGPAGAFI VIVYGIVERY GVPNLLLATA MSGVFLFLMG VFHLGTLVRF
IPIAVIIGFT NGIAFLIGLS QIKEFFGLYI EKMPAQFFQS VHALYLAANT FNPMALAVAC
GSLALLILWK LFQNRLGWLS HLPATVVAMV AATTVTSIFH LPVDTIGSRF GGIPSGLPSF
EWIPISWDGA QHMVAPALTL ALLGAIESLL CARIADGPIH DRHESNQELM AQGIANFTIP
FFGGIPATGT IARTVTNVES GASTPVAGLV HAATLLIIIL FGAPLAKNIP LASLAAILMY
VAWNMGDWRK FIDLKQFRLP YRITILSVFI LMVVLDLTIA VEVGLLLAFI TFIYRISSLS
RCEAALANDF PGLANQQGRI DAYRIHGAIF FGAVKLLEKI ETDLPSHTLL LDLKNVIYID
TSGMDTIMEL AHLCKIRNIR LIICGLAHQP LEMAERSEFI STLPHDAFFP DLISGIEAAT
A
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