| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1351 |
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| Symbol | |
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| ID | 6183210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1165088 |
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| End bp | 1166491 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671903 |
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| Product | Peptidase M23 |
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| Protein accession | YP_001798076 |
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| Protein GI | 171463963 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.749113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00315116 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTCTGGCT TTGCCTTTCT GAGCTCAACA CCGGGCTTTG CCTACGCACA GAGCAAGCAA
ACCCAAAGCT CCAGCCAAGC GCGTAACAAA ATCACCGTCC AAACCACTAA GCAAGTTGGC
TTTAAAGATA AATCTGCTGG CTCTAACTCA AAGACTAGTA GCATGAGTCT GAACCCATCA
CTATTTCAGC ACAAAGCTCC AGATGAGCTC ATGCTAGATA GTGATTCCAA CTTGGACTAT
CGCGTTGCCC AAGGTTGCCT CCGACGCAGC TTGAGCGAAG ATAACCTGCC AGCTAGCGTC
GGTATTGATA ACCGCCAGTT TTCTGAGTTT TTTAAGAACC AGACAAAAAC ATTTTTTGAT
CATATGCGTG GGGATTGCAT CCCCTACGCA GTTGCTTTCG GAAGTCGCAA CCGCTTTGAT
TCATTGAGCA TCATGAATGG CCCAATTCAG GACAGTAAAA CTGAAGTGTG GACATTTACA
CCTTCAGCCG TTGGTGGTTT TTTAATTCAA CAAGACTTCC TCAAGGATGA GTCCAAACGC
TTAACCGAAA TTCGCATTCC CTTAAGGGAT GTCCTATACG ATCCGCGCAA AGTAAGCGAT
CAATTGCCGG TGGAACTTGT TTGGGAATTA AATTCCCTCA TTAAACAAAT TTATCCGGGA
GAAAATAATT CGCTTGAAAA CACTAATAGT GTCGTGCGCT TGATAGTGGA CTTTGGTGAT
CGTGAAAAAT GGGCGCAAAT ATGGGCCGCA GAAATTATTG ATCCTGCCAC CAAAGAAGTT
TATGCAAATG CATTTTGGCT GGAGCGCAAT GACATCCCAG GCGGGTTCTT TACTGGAACC
GGCGAATCAC TTGAGCGCTC ATTCTGGACC AACCCCCTGA GTTATCGTCG CATCTCGCGT
GGGGTTGGCA TGGTAAGAGC GTCTTCTGGC AAGCGTAGCA AGGCTCCAGC GACATCAGTC
AAGCCATCTC CAGCAACCCC TGCACCCGCA ACCAAGCAAC GATATCGCGC TCATATGGGC
ATCGATTACT CCGCACCAAT TGGTACACCT GTCTTTAGTG TTACTAATGG CAGAGTTGCT
CATATTGGCT ACAGCGGTGC ATTCGGCAAC TTGATTGTTT TGGAACATCC AGGCAATTAC
CACACCTACT ATGCACACTT AAGCAACTAC AACGTTGAAC TGGAATTGGG TAATGAAGTG
CGGCGTGGTT TAGAGGTTGG TTATGTAGGG TCAACCGGCA GATCAACCGG CCCACACCTA
CATTTTGAAT TAAGGAAAAA TGGTATTTAC GTGGATCCAT ACGCACCCAA AACTCAGCTC
GATTTATGGT CTATGCGTGA CAACGAAAGC GGTCAACTAA CTAGAGAAAT ACTTTTACTA
GGTAGCCCCA TAAAACACAA CTGA
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| Protein sequence | MSGFAFLSST PGFAYAQSKQ TQSSSQARNK ITVQTTKQVG FKDKSAGSNS KTSSMSLNPS
LFQHKAPDEL MLDSDSNLDY RVAQGCLRRS LSEDNLPASV GIDNRQFSEF FKNQTKTFFD
HMRGDCIPYA VAFGSRNRFD SLSIMNGPIQ DSKTEVWTFT PSAVGGFLIQ QDFLKDESKR
LTEIRIPLRD VLYDPRKVSD QLPVELVWEL NSLIKQIYPG ENNSLENTNS VVRLIVDFGD
REKWAQIWAA EIIDPATKEV YANAFWLERN DIPGGFFTGT GESLERSFWT NPLSYRRISR
GVGMVRASSG KRSKAPATSV KPSPATPAPA TKQRYRAHMG IDYSAPIGTP VFSVTNGRVA
HIGYSGAFGN LIVLEHPGNY HTYYAHLSNY NVELELGNEV RRGLEVGYVG STGRSTGPHL
HFELRKNGIY VDPYAPKTQL DLWSMRDNES GQLTREILLL GSPIKHN
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