| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1305 |
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| Symbol | |
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| ID | 6183186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1127127 |
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| End bp | 1128491 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671866 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_001798039 |
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| Protein GI | 171463926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.80175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0000457117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAAGTCA CCATCATCGG TAGCGGTTAC GTAGGTCTTG TTACTGGCGC ATGCTTAGCA
GAGCAGGGTA ATAACGTCTT TTGCGTTGAC GTAAATCCTA AAAAGATCGA GATTCTCAAT
TCTGGTGGCG TACCGATTTA CGAGCCAGGT CTTAAAGAGA TGATTGAGCG CAATCGTGCT
GCTGGCAGGC TGCAGTTTTC CACCGATATT GCCGCCTCAG TTGCCCATGG CGATATTCAG
TTCATCGCTG TTGGCACACC CCCTGATGAA GATGGTTCAG CCGATTTGCA ATATGTGGTT
GCCGCAGCGC GCAATATTGG CCGCTATATG ACCACTCCTA AAGTGATTGT GGATAAATCC
ACTGTGCCGG TAGGTACTGC CGATAAAGTT CAAGCAGCTA TTATTGAAGA GCTGGAAAAA
AGAGGCTTGC CTGCAGATTT ATGTTCCATA GTTTCCAACC CAGAGTTCCT TAAAGAAGGC
GCTGCCGTAG AAGACTTTAT GCGCCCAGAC CGCATTGTGA TTGGCACAGC CAATACTCCA
TCAGGTCAAA GGGCCAAAGA GCAGATGCGT AAACTCTATG CTCCTTTTAA TCGTAACCAT
GAGCGTACCT ACTACATGGA TGTAAAAAGT GCAGAGCTTA CAAAGTACGC AGCAAACGCC
ATGTTAGCGA CCCGCATCTC CTTTATGAAC GAGTTAGCCA ACTTGGCTGA CTTGGTTGGT
GCTGATATTG AGCATGTTCG CCAAGGTATT GGCTCAGACT CCCGGATTGG CTTTGGTTTT
TTGTATCCTG GCACTGGTTA CGGTGGCTCT TGCTTTCCAA AAGACGTGTC TGTTTTATCC
AAAACTGCTA AAGAGCATGG CCGGGATCTG AAGATTCTGG ACGCCGTAGA AGCGGTCAAT
GAACTACAAA AGTACACCTT AGTAGAGAAG ATCGAAAAGC GCTTTGGCGA GAACCTCAAA
GGCATGAAGT TCGCACTGTG GGGTTTGGCC TTTAAACCCA ATACCGACGA TATGCGCGAA
GCGCCTAGCC GAGTGATCAT CCAAGAATTG GTTAAACGGG GTGCTCAAGT AGTGGCCTAT
GACCCAGTGG CGATGCCAGA AGCAAGACAT GCCTTAGAGT TCGACTTTAA CAGCAACCTT
GCAGGCTTTC AGCAGATCTC TATGACAGAC AATCCAATGA CTGCCTTAGA TGGTGCTGAT
GCCCTAGTCA TTGTTACCGA GTGGAAGGTC TTTCATACCC CTGATTTTGA TTTGCTCATG
CAAAAGCTCA AAAACCCCAT CATTTTTGAT GGTCGTAACC TTTATGAACC ACAGTCCATG
CAAGAATTAG GTATTGAGTA CCATGGCATT GGGCGACATA ATTAA
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| Protein sequence | MKVTIIGSGY VGLVTGACLA EQGNNVFCVD VNPKKIEILN SGGVPIYEPG LKEMIERNRA
AGRLQFSTDI AASVAHGDIQ FIAVGTPPDE DGSADLQYVV AAARNIGRYM TTPKVIVDKS
TVPVGTADKV QAAIIEELEK RGLPADLCSI VSNPEFLKEG AAVEDFMRPD RIVIGTANTP
SGQRAKEQMR KLYAPFNRNH ERTYYMDVKS AELTKYAANA MLATRISFMN ELANLADLVG
ADIEHVRQGI GSDSRIGFGF LYPGTGYGGS CFPKDVSVLS KTAKEHGRDL KILDAVEAVN
ELQKYTLVEK IEKRFGENLK GMKFALWGLA FKPNTDDMRE APSRVIIQEL VKRGAQVVAY
DPVAMPEARH ALEFDFNSNL AGFQQISMTD NPMTALDGAD ALVIVTEWKV FHTPDFDLLM
QKLKNPIIFD GRNLYEPQSM QELGIEYHGI GRHN
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