Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1189 |
Symbol | |
ID | 6184015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1030346 |
End bp | 1030564 |
Gene Length | 219 bp |
Protein Length | 72 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671774 |
Product | protein of unknown function UPF0016 |
Protein accession | YP_001797950 |
Protein GI | 171463837 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.123696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTGATA AGACGCAGAT TGCGACTATT GCTTTAGGTG CTCGTTACGA AGATGTGGTC TCAGTAACCA TTGGCACCAC ATTGGGGATG ATGTTGGCAA ATGCCCCTGC GGTCTGGATT GGCCAAAAGT ATACTAAGCG CATGCCTATC AAGTGGGTTT ATGCGGTGGC GGCCATCACC TTTATTGCCA TTGGCTTAGC CACCTTAATA TGGGCTTGA
|
Protein sequence | MGDKTQIATI ALGARYEDVV SVTIGTTLGM MLANAPAVWI GQKYTKRMPI KWVYAVAAIT FIAIGLATLI WA
|
| |